Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03246 ATGGGTAGTAGACGTAGAATTGCTGAGGATACTAACAAGATTGTGAACGGGATGCCAAGCTACGCTCCACCATTGCCACCTTCTAATTCCATGGGTATGGAAGGAAATATTCATCCTTCTCGACTTTCTGATTTTGGAGCCATCGAACAATCTCTTGGATTTCGCATTGAAGATGCCATGAATCTTAGCAGAAaTCCAGTGTTTAATCAAATGAAATCAAATAGCCAATCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAGCAAGGCAATTGCAAACTCGGATACAAATCTCTCTGCTGCAATTGGTGGATCTCAGACAATGCAATTGCAAAAAGAGTCACAGCCAAATTTGGCTTCAACATCTGGCGGCCATCGTGAGAATTGGGGAGAGTCCAACATGGCTGATGGAAGTGCTGATACTTCAACCGATGACACAGAAGacaaaaatcaaatgCCGGAAAGGGGAGAATCTAGTGAAAGATCAAAAGATAAATCGGATCAAAAGACATTAAGAAGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTGGAGCAAGAGCTACAGCGAGCACGCCAGCAGGGAATATTCATTTCAAGCACCGGAGAGCAGACTCATTCAATGAGTGGAAATGGTGCAATGGCATTTGATGCTGAGTATGCACGATGGTTAGAAGAGCACAATAGGCAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTCCGTACCATTGTGGACAATTTCATGACTCAATTTGAAGATATTTACAGGCTGAAAGGTGTTGCAGCTAAAGCTGATGTTTTCCACATTCTATCTGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCCGAAATTCTTAAGCTTCTGGTAAGCCATTTGGAGCCTTTAACTGAGCAACAATTGATGGGAATCTACAACTTGCAGCAGTCATCCCAACAGGCTGAAGATGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTTTCTGAGACATTAGCTAATGGTTCACCCAACCCATCAGGTTCTTCTGGAAATGTGGCAAACTACATGGGCCAAATGGCTATGGCCATGGGAAAACTCGGTACTCTCGAGGGCTTTCTTCGCCAGGCTGATAACCTGCGGCAGCAAACATTGCAACAAATGCTTCGGATATTAACAACCAGGCAATCAGCTCGAGCTCTTCTCGCAATAAGCGATTATTTCTCCCGGCTGCGAGCACTGAGTTCTCTATGGCTTGCACGGCCAAGGGAATGA 1365 0.4454 MGSRRRIAEDTNKIVNGMPSYAPPLPPSNSMGMEGNIHPSRLSDFGAIEQSLGFRIEDAMNLSRNPVFNQMKSNSQSLGADIQFGALSKAIANSDTNLSAAIGGSQTMQLQKESQPNLASTSGGHRENWGESNMADGSADTSTDDTEDKNQMPERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03246 454 PANTHER TRANSCRIPTION FACTOR TGA9 56 454 - -
Tsu07g03246 454 Pfam Basic region leucine zipper 165 211 IPR004827 GO:0003700|GO:0006355
Tsu07g03246 454 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 56 454 - -
Tsu07g03246 454 MobiDBLite consensus disorder prediction 1 38 - -
Tsu07g03246 454 CDD bZIP_HBP1b-like 169 221 - -
Tsu07g03246 454 MobiDBLite consensus disorder prediction 106 171 - -
Tsu07g03246 454 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Tsu07g03246 454 Coils Coil 188 215 - -
Tsu07g03246 454 ProSiteProfiles DOG1 domain profile. 234 451 IPR025422 GO:0006351|GO:0043565
Tsu07g03246 454 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 211 IPR004827 GO:0003700|GO:0006355
Tsu07g03246 454 MobiDBLite consensus disorder prediction 142 171 - -
Tsu07g03246 454 MobiDBLite consensus disorder prediction 106 140 - -
Tsu07g03246 454 Gene3D - 168 220 - -
Tsu07g03246 454 Pfam Seed dormancy control 252 327 IPR025422 GO:0006351|GO:0043565
Tsu07g03246 454 SUPERFAMILY Leucine zipper domain 169 212 IPR046347 GO:0003700|GO:0006355
Tsu07g03246 454 SMART brlzneu 165 228 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03246 Tsu-Chr7 38750130 38754839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03246 134 454 bZIP Transcription Factor Family AT3G12250 73.716 9.87e-170 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu07g03246 DOG1 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03246 K14431 - gmx:778136 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03246 07 38750130 38754839 Tsu07g03246 07 38750130 38754839 ECH