Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03237 ATGCCTTACCTAGTCCGCGAAAATCTCTTCATCAGCAACATCAACCACGCCgcagaaattctccaaaacGGCACCGTTCCACCTCACAACATCACTCACATCCTCTCCGTTCTCAGTTCCGCTTCCATTTCCTTCTTCACCGAATGGCGTTCTACTCTCTCCATCCCCGTCAACCAGATCTCCAAACTCCATGTCTCCGACCTCCCTACCGCCGCCAAGTCCGCTCTCTCTCCGGATAAACTCCTCTACTCGCTTGAATACGCCGGAAAAGACCTCAAACTTGTGAGGATGGCGGTTCCGTTAAAAGATACAGAGAATGAGAATTTGTTGGATTATCTTgaagtttgtattgattttattgatcgtaGTAGAAAAGAAGGTGGTTCTGTTTTGGTTCATTGTTTTGCTGGTGTTTCTAGAAgTGCATCGATTATTATGGCTTATTTGATGAAAAGTGAAAATCTGTCACAAGAAGATGCATTTGAATCGTTAAGGGAGAGCTGTGGACTTGTTTGCCCCAATGATGGTTTTCTAGAACAGTTGAAAATGTTTGAGGAGATGGGTTTCAAGGTTGATCATTCTAGCCCTGTATATAAGCGGTTTCGTCTGAAAATACTAGGTGAGAATCATTTCTCAGGGTCGAGGATAGACAGTTCTAAACTTGGTGAAGATCCTGGCATGCCTGTTGAAACTTCTTCCGAGGTGGAAGGAGCTACTAAAGTAGAAAATAATCACAGTCCTACCTATCGCTGTAAGAAGTGCCGTCGGATTGTTGCATTGCAAGATCATGTTGTAGATCATATTCCTGGTGAGGGTGAGACATCATTTGGTTGGCACAAGCGGAGAAGCGGCAATCCTTTTAACAAATCGAATGAATCTGAGTGTTCGTCCATATTTATTGAGCCTCTACGATGGATGAAAGATGTTGAGGAAGGCGCATTGGAGGGAAAGCTGTCCTGTGTTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGTGGAAGCTGGATAACCCCAGCTTTTCAACTCCACAAAAGTCGGGTAGATATAAGTCCTGTGTAA 1080 0.4287 MPYLVRENLFISNINHAAEILQNGTVPPHNITHILSVLSSASISFFTEWRSTLSIPVNQISKLHVSDLPTAAKSALSPDKLLYSLEYAGKDLKLVRMAVPLKDTENENLLDYLEVCIDFIDRSRKEGGSVLVHCFAGVSRSASIIMAYLMKSENLSQEDAFESLRESCGLVCPNDGFLEQLKMFEEMGFKVDHSSPVYKRFRLKILGENHFSGSRIDSSKLGEDPGMPVETSSEVEGATKVENNHSPTYRCKKCRRIVALQDHVVDHIPGEGETSFGWHKRRSGNPFNKSNESECSSIFIEPLRWMKDVEEGALEGKLSCVHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03237 359 Gene3D Protein tyrosine phosphatase superfamily 4 207 IPR029021 -
Tsu07g03237 359 ProSitePatterns Tyrosine specific protein phosphatases active site. 132 142 IPR016130 GO:0016311|GO:0016791
Tsu07g03237 359 MobiDBLite consensus disorder prediction 217 237 - -
Tsu07g03237 359 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 190 IPR020422 GO:0006470|GO:0008138
Tsu07g03237 359 Pfam Dual specificity phosphatase, catalytic domain 93 186 IPR000340 GO:0008138|GO:0016311
Tsu07g03237 359 PIRSF DUSP12 74 359 IPR016278 GO:0006470|GO:0008138
Tsu07g03237 359 PIRSF DUSP12 3 71 IPR016278 GO:0006470|GO:0008138
Tsu07g03237 359 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 355 - -
Tsu07g03237 359 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 190 IPR029021 -
Tsu07g03237 359 SMART dsp_5 1 187 IPR020422 GO:0006470|GO:0008138
Tsu07g03237 359 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 110 166 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03237 Tsu-Chr7 38543076 38547096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03237 94 186 Protein tyrosine phosphatase (PTP) family AT3G06110 39.785 1.34e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03237 K14819 - gmx:100776877 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03237 07 38543076 38547096 Tsu07g03237 07 38543076 38547096 ECH