Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03236 ATGGGACTCTGTCATGGAAAACCCATTGAAACTTCAcaaaatgaaagagaaatttcatcttttccAAGTGAAGAAATTCTTCAACTTCCACCACCATCAAGCtctcataatcatcatcattcaaaaacTAAATCATCTTCAAAGTTTCCATTTTTTAGTCCAAGTCCATTACCAAGTTTCTTCAAAAACTCACCtgcaaattcaaattcaaattctagTGTGAGTTCAACTCCTCTTCGGATCTTTAAACGACCCTTTCCTCCTCCTTCTCCGGCAAAGCACATTCGAGCACTGCTCGCGAGACGCCACGGCTCTGTGAAGCCTAATGAAGCCACAATTCCTGAAGGGAGTGAGTGTGAAGTTGGGTTGGATAAGAGTTTTGGTTTTTCTAAGCAATTTGTGACAAATTTTGAGATTGGAGATGAAGTTGGTCGTGGCCATTTTGGTTATACTTGTTATGCTAAGGGTAAAAAAGGAAGCTTTAAGGGTCTTGATGTTGCTGTTAAAGTCATTCCTAAATCTAAGATGACAACGGCAATTGCGATAGAGGATGTAAGAAGAGAAGTGAAGATATTGCGAGCTCTAACCGGTCATAAGAATTTGGTACAATTCTATGAAGCCTATGAAGACGACGAAAATGTTTATGTAGTTATGGAATTGTGCAAAGGAGGCGAATTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACTCGGAAGAGGATGCCAGAGTTGTTTTGATTCAGATATTAAGTGTGGTAGCTTATTGTCATCTGCAGGGCGTTGTTCACCGTGATCTCAAGCCAGAGaattttctttttagttCTGAGGATGAAAATTCCCCACTGAAGGCAATTGACTTTGGACTCTCTGACTATGTAAAGCCAGATGAGAGATTGAATGATATTGTTGGAAGTGCATATTATGTTGCTCCTGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTGTTATGCGGAAGCCGGCCTTTTTGGGCCAGGACAGAATCAGGCATATTTCGAGCTGTTCTTAAGGCAGACCCGAGTTTCGATGAAGCTCCTTGGCCTTCTTTATCGGCTGATGCAAAAGATTTTGTGAAGAGGCTGTTGAATAAAGACTATCGTAAAAGACTAACTGCAGCTCAAGCTCTCAGTCATCCATGGCTGGTGAACCACTTAGAGGATGTAAAGATACCGTTTGATATGATAATCCACAAGCTCATCAAAACTTACATATGCTCGTCTTCTTTACGCAAATCAGCATTAGGGGCTCTTGCCAAGACATTGACATTGGTGCAGTTAGCATATCTCAAAGAACAATTTACTCTTTTAGGGCCAAACAAAAGTGGACTAATCTCTATGCAGAACTTCAAGACGGCTGTTTTAAAGAGCGCCACTGATGCCTCAAAGGATTCGCGAGTCTTAGATTATGTGAACATGGTTAGCTCAATCCAATATCGAAAGTTAGATTTTGAGGAATTTTGTGCTGCAGCTATAAGTGTCCATCAACTGGAGGGAATGGATACGTGGGAACAACACGCAAGGCGTGCCTACGAGCTGTTTGAAAAGGATGGAAATAGACCAATTATGATCGAAGAGCTTGCCTCGGTACTATTCTTGTGCAATACCATTTTGTCTAACATACCGATATATTTATATTgtgattttacttttttgaattatttggagAATTAA 1725 0.3832 MGLCHGKPIETSQNEREISSFPSEEILQLPPPSSSHNHHHSKTKSSSKFPFFSPSPLPSFFKNSPANSNSNSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGSECEVGLDKSFGFSKQFVTNFEIGDEVGRGHFGYTCYAKGKKGSFKGLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDENVYVVMELCKGGELLDKILSRGGKYSEEDARVVLIQILSVVAYCHLQGVVHRDLKPENFLFSSEDENSPLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHLEDVKIPFDMIIHKLIKTYICSSSLRKSALGALAKTLTLVQLAYLKEQFTLLGPNKSGLISMQNFKTAVLKSATDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMDTWEQHARRAYELFEKDGNRPIMIEELASVLFLCNTILSNIPIYLYCDFTFLNYLEN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03236 574 SUPERFAMILY Protein kinase-like (PK-like) 128 427 IPR011009 -
Tsu07g03236 574 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 554 - -
Tsu07g03236 574 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03236 574 Gene3D Phosphorylase Kinase; domain 1 129 226 - -
Tsu07g03236 574 Gene3D - 419 549 - -
Tsu07g03236 574 Gene3D Transferase(Phosphotransferase) domain 1 227 418 - -
Tsu07g03236 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Tsu07g03236 574 CDD STKc_CAMK 136 398 - -
Tsu07g03236 574 SUPERFAMILY EF-hand 429 555 IPR011992 -
Tsu07g03236 574 MobiDBLite consensus disorder prediction 13 36 - -
Tsu07g03236 574 Gene3D - 440 509 - -
Tsu07g03236 574 Pfam Protein kinase domain 138 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03236 574 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Tsu07g03236 574 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03236 574 PANTHER CDPK-RELATED KINASE 1 37 554 - -
Tsu07g03236 574 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03236 Tsu-Chr7 38531137 38537322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03236 1 554 EF-hand Containing Proteins AT3G50530 65.268 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g03236 Pkinase 9.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03236 - - gmx:100783262 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03236 07 38531137 38537322 Tsu07g03236 07 38531137 38537322 ECH