Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03229 ATGGCGAAGCGGTTGATTCCACTGTTCAATCGTGTTTTGGTTCAGAAAATCGTTGCTCCTTCAAAAACCACCGCTGGCATTTTGTTACCTGAGAAATCCTCCAAGCTTAATTCTGGAAAAGTTGTTGCTGTTGGCCCTGGCCTTCATGGTAAGGATGGGAAACTCCTTCCTGTGGCTGTAAAGGAAGGTGACACTGTTCTCTTACCTGAATACGGAGGAACTGAAGTGAAGCTTGATAACAAAGAGTACTTTTTGTATAGAGATGACGATATATTGGGGACACTGCATGATTGA 294 0.4354 MAKRLIPLFNRVLVQKIVAPSKTTAGILLPEKSSKLNSGKVVAVGPGLHGKDGKLLPVAVKEGDTVLLPEYGGTEVKLDNKEYFLYRDDDILGTLHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03229 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Tsu07g03229 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 Hamap Co-chaperonin GroES [groES]. 4 96 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu07g03229 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Tsu07g03229 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03229 Tsu-Chr7 38405706 38409588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03229 3 96 Calmodulin-binding Proteins AT5G20720 38.542 1.45e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03229 K04078 - gmx:100800967 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03229 07 38405706 38409588 Tsu07g03229 07 38405706 38409588 ECH