Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03228 ATGAAGATATTCACCCTCTTGCTAATAATTTCCACAGCTACCACTATCAATGCAGAAGAATACAATGAAACAAATTACATGTCCGACTTATTGCAATCACTAACCAATACTCCCTCTAGCTGGTCTAACAAAATTCACTACTGCAAATGGAAAGGCATCACTTGCAACTCTACTACTCAAGCTGTTACCTCCATCATCCTCCCATCAAATTCACTCACCGGCAAACTCCCTTCCAACATCAACTCTCTAACTAATCTCACTCATATCGATCTCCACAACAACTCACTCAATGGTCATTTACCTGATTTTGTTAACCTCATTATGCTCCAAACTATTTCCCTTGGTCACAATAACTTCACCACTGTCCCTGATTATATCTTTGTAAACTCGGATGATCTCAGAATTGTTAACCTTAGCAATAACTTGGATCTTGGTGGATTGTCTACGTCTAATTTACCTTCCTCCACCTCTTTGCACACCCTCGATTTTGAAGCTACGAATATGATAGGTTCATTTTTAGATCCTGATATATTCGATTGGTATCCAAATTTGCATACTTTTATTATTTCTCACAACAAAATGGAAGGAGCTCTACCCCCGTCTCTTGGGAAATCTGCAGTAAGGTATTTACAGCTTAACAACCAGAGAGGTAATGCGTTTTCGGGCTCAATTGACTTTATATCAACAATGACCAATTTGTCTCAAGCATGGCTTCACCATAACAGTTTCAAGGGTCATATTCCTGACATGTCCAAATGTACtaatttgtttgatttacaGCTTCAGTCAAATACCTTAACTGGTTTGGTTCCACCTTCGTTGCTTTCTCTTAGTAGCTTGAAAATTATCAATTTGGAACAAAATGCGCTTCAAGGACCGTTACCCGAGTTTCGCAAGGGTGTTAACGCAACTTTGGAAACAAACTACTTTTGTCGAAGCGATGTTGGACCTTGTGATTCCCAGGTTATgattttatatgaaatttttgAAGCTCTTGGGTCTCCTGCATTTTTGGCAACTCAAGGGAACAATGTTTGTAGAGGAGGGACATGGATCAAGTTAATGCCCAATCGAGTACAGGTTAAGTGTGAAAGAGGAAAAATTGTTAGCTTTATGATCTGCTATGTTAATACATTACTTGATGGTGGAAGTGGAACCATCTCTCCCAAATTTTCCAATTTAAAAAGTTTAGTAAACTTGACTCTTGTTGGAAATAATTTGACAGGTCCAATACCAAAAAGTCTTACAACTTTGCCTCAACTTCAAGTTCTTGATGTTTCTAATAATAATCTGTCAGGATTAATTCCCAATTTTTCATCCAAAGTTAAGTTAAATGTCACAGGTAATAATTTGCTAAGCCAAAACATGTCTAGACAAGGTGGAAGTGAAAATGCAACTACTACTCCAGGTGATGTTCAAACAGGAGGTTCATCTAAACAAAACCTTAGACGTTTTTGGATTGCAGGGGCCTTGATGTTTGGTGTTGGATTTGTCATTTTTATTGTGTTGATTTGTAAACACAAGAGGTATCATATTTTAGTAAAAAGGTGGGTCTTCAAGAAAACAAGAAAATCTATTGACTACAATGTTGAGGATTTCATACAAAATTACAACTTGTCGGTGCCAATTAAGCAATATAGATATTCAGAAGTGAAAAGAATGACAAATTCATTCCGGGAGAAATTAGGTCAAGGAGGATACGGTGTTGTTTACAAAGCAAGTTTACCCGATGGACGTCAAGTGGCGGTGAAAGTAATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTAGCTAGCATTAGTAGAACGTCACATGTGAACATCGTTTCACTTTTGGGTTTTTGTTATGAGAACAAAAGAGCATTAATATATGAATTCATGTCTAACGGATCATTGGATAAGTTTATCCTTAAAGGCGGATTTCCTAATGCTATTTGTAGTTTGGATTGGAACACAATGTATACAATTGCAATTGGCATTGCTCGAGGACTAGAATACTTGCATCAAGGATGTATTTCAAGGATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTGGATGAagatttttgtccaaaaatttCTGATTTTGGGCTAGCTAAAATATGCCAAAAGAATAATAGTATTGTGTCTATACTTGGCACAAGAGGAACCGTAGGATACATAGCACCAGAAGTATTTAGCCGAACGTTTGGTGGAGTTTCTCACAAGTCTGATGTATACAGTTATGGTATGTTAATTTTAGAAATGATTGGAGGAAAAAAGAATTATGACACTGGAGGTTCATGTACATCTGAAATGTACTTTCCAGACTGGATTTATAAGGATCTTGAACAAGGTAACAACCATGAGAGTAGTTCGgaaaattttgaggaagaaaatgatATGGTGAGAAAGATTACTATGGTAAGTCTATGGTGCATTCAAACAAATCCATCAGATAGGCCATCAATGAGTAAAGTAATAGAAATGCTTCAAGGACCACTTCTGTCAATTAATGAGAACAAACTATATGTAAATTCACATgtgcaaattcaaaagtttgttacaagttag 2568 0.3544 MKIFTLLLIISTATTINAEEYNETNYMSDLLQSLTNTPSSWSNKIHYCKWKGITCNSTTQAVTSIILPSNSLTGKLPSNINSLTNLTHIDLHNNSLNGHLPDFVNLIMLQTISLGHNNFTTVPDYIFVNSDDLRIVNLSNNLDLGGLSTSNLPSSTSLHTLDFEATNMIGSFLDPDIFDWYPNLHTFIISHNKMEGALPPSLGKSAVRYLQLNNQRGNAFSGSIDFISTMTNLSQAWLHHNSFKGHIPDMSKCTNLFDLQLQSNTLTGLVPPSLLSLSSLKIINLEQNALQGPLPEFRKGVNATLETNYFCRSDVGPCDSQVMILYEIFEALGSPAFLATQGNNVCRGGTWIKLMPNRVQVKCERGKIVSFMICYVNTLLDGGSGTISPKFSNLKSLVNLTLVGNNLTGPIPKSLTTLPQLQVLDVSNNNLSGLIPNFSSKVKLNVTGNNLLSQNMSRQGGSENATTTPGDVQTGGSSKQNLRRFWIAGALMFGVGFVIFIVLICKHKRYHILVKRWVFKKTRKSIDYNVEDFIQNYNLSVPIKQYRYSEVKRMTNSFREKLGQGGYGVVYKASLPDGRQVAVKVINESKGNGEEFINEVASISRTSHVNIVSLLGFCYENKRALIYEFMSNGSLDKFILKGGFPNAICSLDWNTMYTIAIGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQKNNSIVSILGTRGTVGYIAPEVFSRTFGGVSHKSDVYSYGMLILEMIGGKKNYDTGGSCTSEMYFPDWIYKDLEQGNNHESSSENFEEENDMVRKITMVSLWCIQTNPSDRPSMSKVIEMLQGPLLSINENKLYVNSHVQIQKFVTS 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03228 855 Pfam Protein kinase domain 559 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03228 855 SUPERFAMILY Protein kinase-like (PK-like) 534 829 IPR011009 -
Tsu07g03228 855 SMART serkin_6 556 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03228 855 Gene3D Transferase(Phosphotransferase) domain 1 630 848 - -
Tsu07g03228 855 SUPERFAMILY L domain-like 31 444 - -
Tsu07g03228 855 MobiDBLite consensus disorder prediction 455 477 - -
Tsu07g03228 855 Gene3D Ribonuclease Inhibitor 22 318 IPR032675 -
Tsu07g03228 855 ProSitePatterns Protein kinases ATP-binding region signature. 562 584 IPR017441 GO:0005524
Tsu07g03228 855 SMART LRR_typ_2 418 440 IPR003591 -
Tsu07g03228 855 SMART LRR_typ_2 83 105 IPR003591 -
Tsu07g03228 855 SMART LRR_typ_2 106 129 IPR003591 -
Tsu07g03228 855 SMART LRR_typ_2 277 299 IPR003591 -
Tsu07g03228 855 Pfam Leucine rich repeat N-terminal domain 31 56 IPR013210 -
Tsu07g03228 855 Gene3D Ribonuclease Inhibitor 334 456 IPR032675 -
Tsu07g03228 855 ProSiteProfiles Protein kinase domain profile. 556 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03228 855 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 836 IPR045874 GO:0004672
Tsu07g03228 855 Gene3D Phosphorylase Kinase; domain 1 530 629 - -
Tsu07g03228 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Tsu07g03228 855 PANTHER TYROSINE KINASE FAMILY PROTEIN 9 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03228 Tsu-Chr7 38396367 38399252 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03228 535 834 Receptor kinase-like Gene Family AT4G18250 60.390 3.08e-124 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu07g03228 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03228 - - cam:101489592 995.342