Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03226 ATGAACATATTCACTCTCTTACTAATAATTTCCATAGCTACAATTATTAATGCAGAAGAATACAATGAATCAAATTACATGTCCGACTTATTGCAATCACTAACCAATATTCCCTCTAGCTGGTCTAACAAAATTCATTACTGCAAATGGAAAGGCATTACTTGCAACTCAATTCCAGCTGTTACCTCCATCATCCTCCCATCAAATTCACTCACCGGCACACTTCCTCCCAACATCAACTCTCTAACTAATCTCACTCACATCGATCTCCACAACAACTCACTAAATGGTCCTTTACCTGATTTTGGTAACCTCATTATGCTCCAAACTATTTCCCTTGGTCACAATAACTTCACCGGCTCTATCCCCGACAATACTTTTCGATACTTATCTGATCTCAGAACTCTTAACCTTAGTAATAACATGAATCTCTCCCACTGGGAATTTCCTACCAATTATTTACCTTACTCCGGTTCTTTGCATACTCTCGACTTTGAAGCTACGAATATGATAGGCTCATTTTCAGATAATATATTCAACTCTTATCGAAATTTAAATACTTTGATTATTTCTAACAACCAAATGAAAGGAGTTCTACCCCCGTCTCTCGGGAAATCTGGAGTAAGATATTTACGGCTTGACAATAATGGGTTTTTGGGCACAATTGACATTATATCAACAATGGCCAATTTGTCTCAAGCATGGCTTCAAAATAACGATTTCACGGGTCAAATTCCAAACATGTCTAAATGTACTAATTTGTTTGATTTGCAGCTTCAGACAAATACATTTACCGGTTTGGTTCCACCTTCATTGCTTTCTCTTACTAGCTTGAAAATTGTCAATTTGGGACAAAATGGGCTTCAAGGACCGTTACCTGAGTTTCGCAAGGGTGTTAACGCAACTTtggaaacaaataatttttgtcGAAGCGATGTTGGACCTTGTGATTCTCAGATTAcaattttatatgaaatttttgAAGCTCTTGGGTCTCCTCAATATTTGGCAACTACAGGGAATAATGTTTGTACCGGAGGGCAGTGGCTCCAGATGATGCCCGATCGAGTACAGATTAAGTGTGAAAGAGGGAAAATTGTTAGTTTTATGATCTGCTATGTAACTTTACTTGATGGTAGAAGTGGAATCATCTCTCCCAAATTTTCCAATTTAACAAGTTTAGTGAACTTGACTCTTGTTGGAAATAATTTAACAGGTCCAATACCACAAAGTCTTACAACTTTACCTCAACTTCAGTTTCTTGATGTTTCTAATAATAATCTATCAGGACTTATTCCAAAATTTTCATCCAAGGTTAAGTTAAATACCACAAGCAATAATTTGCTAGGGATAAATATGTCTGGACAAGGTGGAGGTGAAAATGCAACTACTCCACCAGGTGATGTTCACACTGGAGGTTCGTCTAAAGCAGCAAACCTTAAACCTTTTTGGATTGCAGGGGCCTTGATGTTTGGTGTTGGATTTGTCATACTTATTGTGTTGATTTGTAAACACAAGAAGTATCATATTTCAGTAAAAAGGTGGGTCTTCAAGAAAACAATACAATCCATTGACAACAATGTGGAGGATTTCATACAAAGTTATAACTTGTCAGTGCCAATTAAGCAATATAGATATTCAGAAGTGAAAAGAATGACAAACTCATTCCAAGAAAAATTAGGTCAAGGAGGATACGGTGTTGTTTACAAAGCAAGTTTACCTGATGGACGTCAAGTGGCGGTGAAAGTGATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTAGCTAGCATCAGTAGAACGTCACATGTGAACATCGTTTCACTTTTGGGTTTTTGTTATGAGAGCAAAAGAGCATTAATATATGAATTCATGTCCAAGGGATCATTGGATAATTTTATCCTTAAAAGTGGATGTCCTGATGTTATTTGTAGTTTGGATTGGAATAGAATGTACAACATTGCAATTGGCATTGCTCGGGGACTAGAATACTTGCATCAAGGATGTATTTCAAGGATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTGGATGAagatttttgtccaaaaatcTCTGATTTTGGATTAGCTAAAATATGCCAAAGGAATAATAGTGTTGTATCTATGCTTGGCACAAGAGGAACCATAGGATACATATCACCGGAAGTATTTAGCCGAACGTTTGGTCAAGTTTCTCACAAGTCTGATGTATACAGTTATGGTATGTTAATTCTAGAAATGATTGGAGGAAGAAAGAATTATGACACTGGAGGTTCATGTACATCTGAAACGTACTTTTCAGACTGGATTTATAAGGATCTCGAACAAGGTAACAACCTTGAGAGTTGTTTGTCAAATTCCGAGGAAGAAAATGATATAGTGAGAAAGATTACTATGGTAAGTCTATGGTGCATTCAAACAAATCCATCAGATAGGCCATCAATGAGTAAAGTAATAGAAATGTTGCAAGGACCACTTCAGTCAATGCCATATCCTCCAAAGCCTTTCTTATATTCTCCTGAAATGTCATCATTACAAACTTCATATGTGTCTTCCAGCAATTTGCTAGAAACAAATTCAGAAAGACATAGTGAAAATGTGATTGCAATGTAA 2628 0.3584 MNIFTLLLIISIATIINAEEYNESNYMSDLLQSLTNIPSSWSNKIHYCKWKGITCNSIPAVTSIILPSNSLTGTLPPNINSLTNLTHIDLHNNSLNGPLPDFGNLIMLQTISLGHNNFTGSIPDNTFRYLSDLRTLNLSNNMNLSHWEFPTNYLPYSGSLHTLDFEATNMIGSFSDNIFNSYRNLNTLIISNNQMKGVLPPSLGKSGVRYLRLDNNGFLGTIDIISTMANLSQAWLQNNDFTGQIPNMSKCTNLFDLQLQTNTFTGLVPPSLLSLTSLKIVNLGQNGLQGPLPEFRKGVNATLETNNFCRSDVGPCDSQITILYEIFEALGSPQYLATTGNNVCTGGQWLQMMPDRVQIKCERGKIVSFMICYVTLLDGRSGIISPKFSNLTSLVNLTLVGNNLTGPIPQSLTTLPQLQFLDVSNNNLSGLIPKFSSKVKLNTTSNNLLGINMSGQGGGENATTPPGDVHTGGSSKAANLKPFWIAGALMFGVGFVILIVLICKHKKYHISVKRWVFKKTIQSIDNNVEDFIQSYNLSVPIKQYRYSEVKRMTNSFQEKLGQGGYGVVYKASLPDGRQVAVKVINESKGNGEEFINEVASISRTSHVNIVSLLGFCYESKRALIYEFMSKGSLDNFILKSGCPDVICSLDWNRMYNIAIGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRNNSVVSMLGTRGTIGYISPEVFSRTFGQVSHKSDVYSYGMLILEMIGGRKNYDTGGSCTSETYFSDWIYKDLEQGNNLESCLSNSEEENDIVRKITMVSLWCIQTNPSDRPSMSKVIEMLQGPLQSMPYPPKPFLYSPEMSSLQTSYVSSSNLLETNSERHSENVIAM 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03226 875 Pfam Leucine rich repeat N-terminal domain 33 56 IPR013210 -
Tsu07g03226 875 Pfam Protein kinase domain 557 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03226 875 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 865 IPR045874 GO:0004672
Tsu07g03226 875 SMART serkin_6 554 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03226 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Tsu07g03226 875 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 865 - -
Tsu07g03226 875 SUPERFAMILY L domain-like 31 443 - -
Tsu07g03226 875 SUPERFAMILY Protein kinase-like (PK-like) 530 827 IPR011009 -
Tsu07g03226 875 SMART LRR_typ_2 415 437 IPR003591 -
Tsu07g03226 875 SMART LRR_typ_2 105 129 IPR003591 -
Tsu07g03226 875 SMART LRR_typ_2 82 104 IPR003591 -
Tsu07g03226 875 Gene3D Ribonuclease Inhibitor 22 316 IPR032675 -
Tsu07g03226 875 Gene3D Phosphorylase Kinase; domain 1 528 627 - -
Tsu07g03226 875 ProSiteProfiles Protein kinase domain profile. 554 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03226 875 Gene3D Transferase(Phosphotransferase) domain 1 628 835 - -
Tsu07g03226 875 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Tsu07g03226 875 Gene3D Ribonuclease Inhibitor 321 453 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03226 Tsu-Chr7 38377337 38380328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03226 479 866 Receptor kinase-like Gene Family AT4G18250 49.752 1.97e-126 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu07g03226 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03226 - - cam:101489592 1060.83