Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g03216 | ATGAAGTCAGAAGAACTTGATCACTGGAGAAAGTACTTTCGTTCATCTAACTCTGACATCTTTAGCATCATTGATAATGCTATTGTTGTTGCTGCTAAGGATTGTCCTAAGGAGTTTAAGTCTAGGAGAGACAAAATTGCTGAGAGACTTTTCTCAGTTTTGCTGAATCGTTGTAAGGACTGTGAGAAGGTTGAAGTGCCTGTTTCTGATAATGAAAATGGTGAAGTTTGTAAGAGAGGTTCTGTTAAAAATGGTGCTAGTAAGGAGAGTAATGTTAATGGTGCTGGTAGGGAAGATAATGAAGTGATGAAGGTGAAACCTGCTAGCAATTATAGCTTTGATGAAGCTGAAGCTCTTACTGATGAACTTGAGGCAGAATCTCAAGCTATTGCTGAAGTTTTGAGGATCAAAGAGGTTCTCAGAAACAAGGAAGATGAGTCTGAATCAGTGCTGTTTGAGTCACTACGGAGGCTTGAACTGATGGGAATGTCTATGAATATTCTGGAgTCAACTGCAATCGGAAAGGCTGTCAATCCTCTCCGGAAGCATGGATCCAAGCAAGTTCGTGATCTCGCAAAGATTCTTATTGTTGCTTGGAAGGAAATGGTGGATACATTTTATGCCAAACGTGACCCAGCTGGAGGAGAAAACACTCCGGAATCGTTAAATCCATCTGGCGTTGTGAatgcagaagaagaagaagaaggaggacTTCCGTCAATTCCTTTGGACGAAGGGGCTTTCTTTGTGGCTCCATCCGGAATGGATTTCTCTGATCAGTTCTTCGATGGCATGGATGATGACGGAAATATTCAAAAGAGTGCACCACTCAACAAGAACCATGGCAATGGCAGAAGGCCAGCTATGGACACTGAAATTAAGGACAAAAGAAATGTGCCGGCATTTAATGGAACAGCCATCATTCCCAAGGACAATAAGAGTCAGCAATTGAAGAAGAATGAGGCCGAAGTGAGGCAAAATAAACTGAAACTGGTAGATGCTGATTCTGGCCCTCGCAGATACCTAACGTCAAACATTCAGCGAAATGGCAATGTGGAGCCAAAGATGCAGCAGAAACTGGAAAGCAGTGCTGTCCCAAAGAGGTCTTTAAATGCTCAGCAAGAtAATTCCAAGTGTTCTGATGATGCTGCTAAGCTCGAAGCCGCTAAGCGGAGACTTCAAGAGAATTATCAACTAGCCGAAAATGCTAAGAGGCAAAGGACAATTCAAGTGATGGATATCAATGAACTTCCAAAGCAAGGGACTGGCCACCGGAACACACATTTCAAACCGGGAAATCAAAATAGGCAGCGAGGTCTTCTGCGAAGATAG | 1332 | 0.4197 | MKSEELDHWRKYFRSSNSDIFSIIDNAIVVAAKDCPKEFKSRRDKIAERLFSVLLNRCKDCEKVEVPVSDNENGEVCKRGSVKNGASKESNVNGAGREDNEVMKVKPASNYSFDEAEALTDELEAESQAIAEVLRIKEVLRNKEDESESVLFESLRRLELMGMSMNILESTAIGKAVNPLRKHGSKQVRDLAKILIVAWKEMVDTFYAKRDPAGGENTPESLNPSGVVNAEEEEEGGLPSIPLDEGAFFVAPSGMDFSDQFFDGMDDDGNIQKSAPLNKNHGNGRRPAMDTEIKDKRNVPAFNGTAIIPKDNKSQQLKKNEAEVRQNKLKLVDADSGPRRYLTSNIQRNGNVEPKMQQKLESSAVPKRSLNAQQDNSKCSDDAAKLEAAKRRLQENYQLAENAKRQRTIQVMDINELPKQGTGHRNTHFKPGNQNRQRGLLRR | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g03216 | 443 | CDD | TFIIS_I | 130 | 204 | - | - | |
Tsu07g03216 | 443 | MobiDBLite | consensus disorder prediction | 418 | 434 | - | - | |
Tsu07g03216 | 443 | MobiDBLite | consensus disorder prediction | 349 | 382 | - | - | |
Tsu07g03216 | 443 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED | 1 | 438 | - | - | |
Tsu07g03216 | 443 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 131 | 215 | IPR035441 | - | |
Tsu07g03216 | 443 | MobiDBLite | consensus disorder prediction | 349 | 379 | - | - | |
Tsu07g03216 | 443 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED | 1 | 438 | IPR044805 | - | |
Tsu07g03216 | 443 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 122 | 213 | IPR035441 | - | |
Tsu07g03216 | 443 | Pfam | TFIIS helical bundle-like domain | 155 | 203 | IPR017923 | - | |
Tsu07g03216 | 443 | Coils | Coil | 116 | 136 | - | - | |
Tsu07g03216 | 443 | ProSiteProfiles | TFIIS N-terminal domain profile. | 131 | 206 | IPR017923 | - | |
Tsu07g03216 | 443 | Coils | Coil | 376 | 406 | - | - | |
Tsu07g03216 | 443 | SMART | TFS2_5 | 130 | 205 | IPR003617 | GO:0005634 | |
Tsu07g03216 | 443 | MobiDBLite | consensus disorder prediction | 418 | 443 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g03216 | Tsu-Chr7 | 38277998 | 38281510 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Tsu07g03216 | Med26 | 2.6e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g03216 | - | - | gmx:100775579 | 453.366 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu07g03216 | 07 | 38277998 | 38281510 | Tsu07g03216 | 07 | 38277998 | 38281510 | ECH |