Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03211 ATGGCTTCAAGAATTGttcctcaacaacaacaacaacccaaAGGTGATGCAGTAGTGGGGGGAGGGAAACCGGTGAAGAAGAACGGTGCAGCAGGCGAAGGAAGGAACCGCAGAGCACTTCTTGATATTGGAAATGTTGTCACTCTAAAAGGTGTTGAAGTCAAGCCAAATCGTCCTGTCACAAGGAGTTTTTGTGCACAGTTACTTGCCAATGCTCAAGCAGCAGCAGCTAATGAGAATAATAAGAAACAGGCTTGTGCCAAAGTACCTACTGCTGCTGTTGATGGAGTTGCAGTAGTGGCTAAAAGAGTGGCCCCTAAACCTGCTGTTCAGAAGAAAGTCACTGCAAAACCAAAGCCTGTGGAAGTCATTGAAATCTCAGATGAAAAGGACAATGAAGACAAGGCTGTGCACAAGAAAAAGGAAGCAGCAGATGTTAATTCTAAGAAGAAATCATCACGCACTCTTACTTCTGTTCTCACAGCCAGAAGCAAGGCTGCATGTGGTTTGACTAACAAACCAAAGGAAATTGTTGACATTGATGCTGGTGATGTTAACAATGAACTTGCTGCTGTTGAATATCTTGAAGATATTTACAAGTTCTATAAGATAGTTGAGAATGAGAATCGTCCACATGATTACATGGATTCACAGCCTGAGATAAATGAGAGAATGAGGGCAATACTCATTGATTGGCTAGTAGATGTTCACACCAAATTTGATCTTTCACCTGAAACACTTTATCTCACAATCAACATAGTTGATAGATTCCTAGCTGTCAACCTTGTGCCAAGAAGAGACCTTCAATTGGTTGGAATCAGTGCCATGCTTATGGCATCAAAGTATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTGACCCTCTCAGATTATGCTTACACTCATGACCAAATTCTTATCATGGAGAAAACCATCTTAGGCAAACTTGAATGGACATTAACTGTGCCTACACCTTTTGTGTTCCTTGTCCGTTTCATCAAAGCGGCATCAGTGCCATCTGTGTCATCGGTGTCGTCCGGTGTTCCTTCTGAACAAGAATCTTTGGAGAACATGGCTCACTTTCTTTCTGAATTGGGTATGATGCACTATGCTACCTTAATGTACTGTCCATCAATGGTTGCTGCAGCAGCAGTTTTTGCAGCAAGATGCACTTTGAACAAGAGTCCTGTTTGGAATGAGACACTGAAGATGCACACTGGTTACGCAGAAGAACAGTTAATGGATTGTGCTAAGTTGTTGACTAGTTTTCACTCTAGTATTGGGAATGGAAAGCTGAAGGTTGTCTATAGGAAGTACTCTGATCCTCAGAGAGGTGCTGTTGCTGTGATTCCACCAGCAAAGAATCTTTTGCATGCTGTTGGTTCTGTCTAG 1395 0.4165 MASRIVPQQQQQPKGDAVVGGGKPVKKNGAAGEGRNRRALLDIGNVVTLKGVEVKPNRPVTRSFCAQLLANAQAAAANENNKKQACAKVPTAAVDGVAVVAKRVAPKPAVQKKVTAKPKPVEVIEISDEKDNEDKAVHKKKEAADVNSKKKSSRTLTSVLTARSKAACGLTNKPKEIVDIDAGDVNNELAAVEYLEDIYKFYKIVENENRPHDYMDSQPEINERMRAILIDWLVDVHTKFDLSPETLYLTINIVDRFLAVNLVPRRDLQLVGISAMLMASKYEEIWPPEVNDFVTLSDYAYTHDQILIMEKTILGKLEWTLTVPTPFVFLVRFIKAASVPSVSSVSSGVPSEQESLENMAHFLSELGMMHYATLMYCPSMVAAAAVFAARCTLNKSPVWNETLKMHTGYAEEQLMDCAKLLTSFHSSIGNGKLKVVYRKYSDPQRGAVAVIPPAKNLLHAVGSV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03211 464 PIRSF Cyclin_A_B_D_E 1 464 IPR039361 -
Tsu07g03211 464 MobiDBLite consensus disorder prediction 1 15 - -
Tsu07g03211 464 Gene3D - 197 449 - -
Tsu07g03211 464 Pfam Cyclin, C-terminal domain 324 453 IPR004367 -
Tsu07g03211 464 SMART cyclin_7 328 423 IPR013763 -
Tsu07g03211 464 SMART cyclin_7 231 315 IPR013763 -
Tsu07g03211 464 SMART Cyclin_C_2 324 454 IPR004367 -
Tsu07g03211 464 PANTHER CYCLINS 24 459 IPR039361 -
Tsu07g03211 464 SUPERFAMILY Cyclin-like 325 456 IPR036915 -
Tsu07g03211 464 CDD CYCLIN 322 421 IPR013763 -
Tsu07g03211 464 MobiDBLite consensus disorder prediction 1 36 - -
Tsu07g03211 464 CDD CYCLIN 225 314 IPR013763 -
Tsu07g03211 464 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Tsu07g03211 464 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 24 459 - -
Tsu07g03211 464 Pfam Cyclin, N-terminal domain 197 321 IPR006671 -
Tsu07g03211 464 SUPERFAMILY Cyclin-like 186 321 IPR036915 -
Tsu07g03211 464 Gene3D - 211 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03211 Tsu-Chr7 38193493 38195993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03211 1 463 Core Cell Cycle Gene Families AT4G37490 52.599 5.36e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03211 K21777 - mtr:MTR_7g089080 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03211 07 38193493 38195993 Tsu07g03211 07 38193493 38195993 ECH