Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03210 ATGtcttcttcaaattcaaagCACAGTAataacaacagcagcagcaacaagAAGAagcaatcaaaatcaaaatcaaggtTACCGCCGTCATTTCCCGACGCCGCCACTCCACCCCGTACCACCACCGCCGCCGAACCACAACAATTCACCTCTCTCATCGAACAAGCTTCTCAAATCTTCCCATCCTTCATTTCACAATCCGCTTTCATAGCTGAAATCACTGACATCGATTCTTCCAATTCAACTTCCAAAGACGCTAAAATTTGGCTTTCTGAGCCTTCTATGGTTGCATCTTCTATTGCTCCCGGTTCACTTGTCTCTGTGTCTATTCCATCTTCAAGTAAAGGGATTGCACAGTTGCATGGATTTCCTCTCATGTCATTGACTAATGAATGTGTTAAATGCTATGGGTTGAAAACTTGTGCCGCATTGGATGATGATGCTGCTGGAAACTACTTTGTTCTTGCAACGGTTTTTCCTTCTACCAAGGTATTGAAGAATGGAGTACGCCTGTCTTCAAATCTTTCCTTTGCGATGGGATGTCCTTCTTTGGGCACATGTGTGTTTGTTCACCCATTACAGAAACAATCCTTGGTATATAATTGCAAAGAATTATATCTTCAACTGGCTCCTTGTAAGAGTGGGCCACCATTGAAAGTTAATAATCTACCCTCATCGGACTTGTCTAAGTCAAGATCTCGTGCCCAATCTGAGAATGATATTTTTGCATCTCCTAAAACACCTTATGGATCAAAGTATTCTAATGACAGTGTTAATTCTTCCCCCATATTTGAAGATTCAGCATCAAGTATAACCAACTCCAATGGTCAATCGGTGGCTTCATTTGATGTTAGCAAGGCATTAGGAAATGAAAGttccaaaaaattattagaaacaTGCACAACTTCATGGTTATACTCTCGTTGTATATTGCTAGGGAATCTTGTCAATGTCCCAATGTTTTCTGAGTTTTGCATTTTCCAAGTGACGGGAATTAAAAAGGTGTCAACTAACATACCTGACTATTGTCTATTGAATGGGAGCGGTGATTTAAATCTTGAGGATTCTGATATGCTAGAGAATGTGAATCTGGCTTTCACTGTCAATTGGGAAACAAAGGTATTTTTATCTTTGCCTTCAAATGCAACATTTGAAGAATCAATTCGAAGGGATTTATCGTGTCTGAAACTTGATGACAAGGATGTTAAACTCAGCAGTGATAATATTTCTAAATTAGGCGGTCTATCTAAAGAAGAAATGCTTTTaaaggaaataatttatttttcaaagaaCGATTTTTTACCAAGCGATATGCAGAATACCAGAGGTGTCTTTCTACATGGTCCACCTGGTACGGGAAAGACTTCGCTGGTTCGATTATGTGCTCATGATGCTGGGGTcaattttttctcaataaatgGACCTGAAATTGTTACCCAGTACTATGGGGAAAGTGAGAAAGCATTGCATGATGTCTTTGATTCAGCCACTCAAGCTTCACCTGCCGTGATATTTATTGATGAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGGGTTGAAGAGCTATCTAAAAGATTGGTTGGAACCTTATTGAAACTGATGGATGGAATTAGTATAAATGGAGGATTAGTTGTAATTGCTGCTACTAATAGGCCTGACCATGTTGATCCAGCTCTCAGACGACGTGGAAGATTTGACCAGGATATTGAAATTGGTGTGCCATCAAAAGAGCAACGAGAAAATATTTTGCGCACTATTCTCTGTGAAATAGACCATTCTCTTTCTGAGACACAAATTGAAGAACTTGCTTCAACAACTCATGGATTTGTAGGTGCTGATTTAGTTGGCCTCCGCAATTGCGCAAATACTATTTGTCTACGACATTCTATTGAACTCAAACTTAAGAAGATTTGCAATGGTAGTTTGGATGACATAACAGAGCAACCCGCTCCGACAAATAGTGCAACAAACTTGAGAGACCATTCAGAAAAGAGGCAAGTGACTTTTGAGGATTTTCAAAAGGCTAGGCTTGAAATAAGACCTAGTGCCATGAAAGAGGTGACCCTTGAGGTTCCAAAGGTTAAATGGGAAGATATTGGCGGCCAAAGAGAAGTCAAAAACCAATTATTGGAAGCATTAGTATGGCCCCAAAAGCACCGGGATGCATTCACCCGTATTGGGACTGATGCTCCATCAGGTGTATTGATGTATGGGCCTCCAGGTTGTAGCAAAACCCTTATGGCACGTGCAGTTGCTTCTGAAGCAGGACTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGCGAATCTGAGAAGGCTGTCAGATCATTGTTTGTTAAAGCAAGGGACAATGCCCCATCAGTAATATTTTTTGATGAAATAGATAGTCTTGCTATGAATCGTGGGAGAGATGGTGATGGTGTTTCAGTGTCCGATAGGGTCATGTCTCAACTCCTTGTTCAAATGGATGGTGTGCGTAGCAGAGGTGATGTTGCTGTTATAGCTGCTACAAATAGGCCAGACAATATTGACCCTGCTCTTTTAAGACCAGGACGCTTTGACCGTCAACTATATGTTGGACCTCCAAATGAGCAGGACCGAGAAGAGATCTTTAGCATTCATTTGCGCAAAACTCCGTATGATTCTGATGTTAGCATGAAAGAACTGGCTCAACTGACAGATGGTTATACTGGGGCTGATATATCACTTATATGTCGACAAGCCGCTCTTGCAGCATTAGAGGAAAGCTTTGATGCTTCTGTTGTAACAATGAAGCACTTTAAGATGGCAATTGAACAAGTTCAGCCCTCTGAAATTCAGTTCTATCAAAAGTTCTCAGCAACATTTCATAGGGGCGTGCCCTCTGATGGGGCCGATATAAATGGTTAA 2907 0.3966 MSSSNSKHSNNNSSSNKKKQSKSKSRLPPSFPDAATPPRTTTAAEPQQFTSLIEQASQIFPSFISQSAFIAEITDIDSSNSTSKDAKIWLSEPSMVASSIAPGSLVSVSIPSSSKGIAQLHGFPLMSLTNECVKCYGLKTCAALDDDAAGNYFVLATVFPSTKVLKNGVRLSSNLSFAMGCPSLGTCVFVHPLQKQSLVYNCKELYLQLAPCKSGPPLKVNNLPSSDLSKSRSRAQSENDIFASPKTPYGSKYSNDSVNSSPIFEDSASSITNSNGQSVASFDVSKALGNESSKKLLETCTTSWLYSRCILLGNLVNVPMFSEFCIFQVTGIKKVSTNIPDYCLLNGSGDLNLEDSDMLENVNLAFTVNWETKVFLSLPSNATFEESIRRDLSCLKLDDKDVKLSSDNISKLGGLSKEEMLLKEIIYFSKNDFLPSDMQNTRGVFLHGPPGTGKTSLVRLCAHDAGVNFFSINGPEIVTQYYGESEKALHDVFDSATQASPAVIFIDEIDAIAPPRKDGVEELSKRLVGTLLKLMDGISINGGLVVIAATNRPDHVDPALRRRGRFDQDIEIGVPSKEQRENILRTILCEIDHSLSETQIEELASTTHGFVGADLVGLRNCANTICLRHSIELKLKKICNGSLDDITEQPAPTNSATNLRDHSEKRQVTFEDFQKARLEIRPSAMKEVTLEVPKVKWEDIGGQREVKNQLLEALVWPQKHRDAFTRIGTDAPSGVLMYGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFVKARDNAPSVIFFDEIDSLAMNRGRDGDGVSVSDRVMSQLLVQMDGVRSRGDVAVIAATNRPDNIDPALLRPGRFDRQLYVGPPNEQDREEIFSIHLRKTPYDSDVSMKELAQLTDGYTGADISLICRQAALAALEESFDASVVTMKHFKMAIEQVQPSEIQFYQKFSATFHRGVPSDGADING 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03210 968 CDD AAA 701 867 - -
Tsu07g03210 968 Pfam ATPase family associated with various cellular activities (AAA) 444 573 IPR003959 GO:0005524|GO:0016887
Tsu07g03210 968 Pfam ATPase family associated with various cellular activities (AAA) 735 866 IPR003959 GO:0005524|GO:0016887
Tsu07g03210 968 Pfam AAA+ lid domain 889 934 IPR041569 -
Tsu07g03210 968 PANTHER - 83 646 - -
Tsu07g03210 968 Gene3D - 868 938 - -
Tsu07g03210 968 MobiDBLite consensus disorder prediction 1 18 - -
Tsu07g03210 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 687 IPR027417 -
Tsu07g03210 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 945 IPR027417 -
Tsu07g03210 968 MobiDBLite consensus disorder prediction 1 46 - -
Tsu07g03210 968 CDD AAA 442 573 - -
Tsu07g03210 968 Gene3D - 695 943 IPR027417 -
Tsu07g03210 968 Gene3D - 575 694 - -
Tsu07g03210 968 Gene3D - 396 573 IPR027417 -
Tsu07g03210 968 PANTHER - 668 961 - -
Tsu07g03210 968 SMART AAA_5 440 576 IPR003593 -
Tsu07g03210 968 SMART AAA_5 731 869 IPR003593 -
Tsu07g03210 968 PANTHER AAA-FAMILY ATPASE 668 961 - -
Tsu07g03210 968 PANTHER AAA-FAMILY ATPASE 83 646 - -
Tsu07g03210 968 ProSitePatterns AAA-protein family signature. 837 855 IPR003960 GO:0005524|GO:0016887
Tsu07g03210 968 MobiDBLite consensus disorder prediction 223 248 - -
Tsu07g03210 968 ProSitePatterns AAA-protein family signature. 544 563 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03210 Tsu-Chr7 38183604 38192169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03210 16 962 Calmodulin-binding Proteins AT3G56690 50.049 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03210 - - cam:101494446 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03210 07 38183604 38192169 Tsu07g03210 07 38183604 38192169 ECH