Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03207 ATGTTTTCTATTACTGAACTTgatgtacatatatatacttgggCCACCGCTTCCGCGCGGCGCCACTTTCGTTTCTTCCAGTCCCCACCACTTTGGATCATTCCGTGCTATACCATGTGCAGAGATACTGAAAGCTGCACGAGCAGCAGCAACAATCAACAGAAAGCGGAGGAAGTGATTATTGGAAACGCAAAAGCTATTCAAAAACTCAGAGAACTCATCACATTACCTCTTCTCTTCCCACATGAAGCAAATAAGTTGCAAACAGGGTTGTTGATGTGTGGTCCACCTGGCACAGGAAAGACAAAGCTCAAGCAAGCTGTTGAGTGGCCTATGAATCATCCTGCTGCATTTTCAAGATTGGGAATAACCCCTAATCGTGGAATTCTTCTCCATGGGCCTCCGGGATGTTCCAAAACTACTCTTGCTAAAGCTGCTGCAAATGCTGCTAATGTTCCTTTCTTTTCCTTGAGTTGTGCAGATGTACGTTCAAAGTATGTTGGAGATGCAGAAAGTTATCTTCGTGAAATATTTCGCAAAGCACGTCTTGCCGGAaaaagtataatattttttgatgaagTTGATTCAGTAGCTGGCAAACGGGGTGATAGTTCGAGCAGTAGTTCTGCAGCTGATGAGAGGCTTTTATCTACTCTGCTAACTGAGATGGATGGTTTAGAAGAAGCCAAAggAGTCCTTGTTTTTGCAGCTACGAATCGCCCTTATTTACTTGATGCTGCACTTATGCGTCCTGGACGATTTGATATGATTTTGTACGTGCCGCCACCTGATTTGGAGGGTCGATTGGAGATACTTAATGTACACACACGTAGGATGAAATTACAGAGTGGTGTTGATCTTAGAAAACTAGCAGAAGATACCGAGCTCTTCACAGGTGCTGAACTAGCGGGATTGTGTAGAGAAGTTGGAACAGCAGCTCTAAGGGAAAACATTGACGCGAGTGTTGTTTTTAACCGTCATTTCCAGATTGTTAAGAATGCTTTAAATCCAACATTAACAAAAGAAGCAATTGATTCATACTCGTCTTTTAGGAAGACCTCATCTCGAAGCGTTGTCTAG 1080 0.4176 MFSITELDVHIYTWATASARRHFRFFQSPPLWIIPCYTMCRDTESCTSSSNNQQKAEEVIIGNAKAIQKLRELITLPLLFPHEANKLQTGLLMCGPPGTGKTKLKQAVEWPMNHPAAFSRLGITPNRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCADVRSKYVGDAESYLREIFRKARLAGKSIIFFDEVDSVAGKRGDSSSSSSAADERLLSTLLTEMDGLEEAKGVLVFAATNRPYLLDAALMRPGRFDMILYVPPPDLEGRLEILNVHTRRMKLQSGVDLRKLAEDTELFTGAELAGLCREVGTAALRENIDASVVFNRHFQIVKNALNPTLTKEAIDSYSSFRKTSSRSVV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03207 359 PANTHER AAA-FAMILY ATPASE 101 334 - -
Tsu07g03207 359 PANTHER AAA-FAMILY ATPASE 44 104 - -
Tsu07g03207 359 Pfam AAA+ lid domain 285 328 IPR041569 -
Tsu07g03207 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 320 IPR027417 -
Tsu07g03207 359 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 101 334 - -
Tsu07g03207 359 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 44 104 - -
Tsu07g03207 359 Gene3D - 38 104 IPR027417 -
Tsu07g03207 359 Gene3D - 105 263 IPR027417 -
Tsu07g03207 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 104 IPR027417 -
Tsu07g03207 359 CDD AAA 116 262 - -
Tsu07g03207 359 SMART AAA_5 125 264 IPR003593 -
Tsu07g03207 359 Gene3D - 264 355 - -
Tsu07g03207 359 ProSitePatterns AAA-protein family signature. 232 250 IPR003960 GO:0005524|GO:0016887
Tsu07g03207 359 Pfam ATPase family associated with various cellular activities (AAA) 129 261 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03207 Tsu-Chr7 38140986 38157339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03207 101 338 Calmodulin-binding Proteins AT3G56690 45.378 6.99e-65 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03207 - - bna:106426939 335.109