Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03204 ATGGCTTCCTCCAGTTCTTTTTCCATAAACCAGGATTCTGAATCAATATCTAACAATGATGTGTTTTTGAGTTTCTGTGACAAAGACACTGGCAATTCTTTTGCATCATATCTTTATACTGCTCTTACAGTGGCCGGAATTGTTGTTTTCAGGGACGACGGCAAGCTTCCAAACCAAGATCAGATGATAACTTTAAGACCTTCAGTTCTACATGCAATTGAAAGCTCAAGAATTTCTATTATTGTTTTCTCAAAAAACTATGCTCATTCAACATTGTGTCTGCAAGAGTTCGAGAAAATAACGGAGTGCAGCGGAACAATAGACCAGACGGTTGTGCCTGTGTTCTATGATGTGGATTCTTCCGATGGATGTCACCATGAAACTATGATTGGAGAAGCTTTTAAAGATTTTGCACAAAGGATCTCGAAGAAAGACCAATCGAGTGAAGGTAGAAACATTTCAGGATTTAATGTGGATTCAAGGGACGAAGGTGAGGATATCAGGAAAGTAGTAAACCATGTTACTAATTTACTAGACAGGACATACTTATTTGTTGCGGAATATCCAGTGGGGGTAGATTCTCATGTACAACATGTCATTCAACTACTTAACATCCAACAATCAAAAGATACTCTACTGCTAGGGATATGGGGCAGGGGAGGGATTGGCAAAACAACCACTGCTAAAGctgtttataataaaatcagtCGCGATTTTGAGGCAAATAGCTTCCTCCCAAATGTTTGGGAAGTTTGGGCACAAGATAATGGTGGAGTTTCTCTACAACAACAACTTCTTTCTGATATCTACAAAACAACAAAGATAGAGATAGATACAGTTGAATCAGGGAAAGTGATATTGCAGGAAAGACTTAGCCAGAAGAAAATGTTTCTTGTGCTTGATAATGTGAATAACTTGGATCAATTGAATACTCTGTGCGGAAGTCGCAAATGGTTTGGTGAAGGAAGTAGAATAATTATTACAACAAGAGATGTTCATTTACTTCGCAGGCTTCAAGTTGACCATGTGTATGAAATGCAAGAAATGTATGTCAGCGAGTCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAACCAAATCCTACCGAAGATTTTGCTGAACTTTCTAAAAAAGTTGTTAACTATTATGGGGGATTACCACTAGCTCTTGAAGTCATTGGGTCCTTTTTGTTGACTAGGACAAGGAAAACAGAGTGGGCGAGTGTATTGTATAAACTCAAACGCATTCCCAATGGTGAAGTGTCAAAGAAGCTTAGAATAAGTTTTGATGGTTTAAGTGATAATATGAAAGAGATATTCCTTCATATCACTTTTTTCTGTATTGGGATGGACCGGGAAGATGCAACTAAAATATTGGAAGACTTGGGGCATTGTGTAGATGAAATAAGTGCTCTTATACGACAAAGCCTTGTAACTGTTGATCAGATGAACAAGATTGAAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATAAGGGGAAAATCAACGAGTGTGGCTAATgAAAGGATCTACGATGTGTTCTTGAGTTTCAGAGGGGAAGACTGTCGTGCAAAATTCATTTCACATCTCTATACCTCCCTTCAAAATGCTGGGATGTATGTTTTCAGAGACAATGATGAGATTCGACGCGGAGATCAGATCTCATTCTCACTTTTGGAAGCAATCGGAAAGTCTAGAATTTCTATTGTTGTTTTATCTAGTAATTACGCTAATTCAAGATGGTGTTTGCTAGAGTTAGAGAGCATCATGGAATCTTGCAGAAGCGGTGGTCTGGTGGTTATACCAGTGTTCTATGAGGTAGATCCCTCCGAAGTACGACATCAAAACGGCAAGTTTGGAGAAGGTTTTAAAAATCTCATATCAGGAGTCTCGGTGGTGGGTAGGAAGATGAATTGGAAAACAGCACTCCTTGAAATCGGTGGCACAGCAGGGGTTGTCGTCCTAAATTCCAGGAATGAAAGTGACGATATCTGTAAAGTAGTAGACCATGTTACTAAATTACTAGGCAATACAGACTTATTTGTTGCGGACCATCCAGTGGGGGTAGATTCTCGTGTACAAGATGTTATTCAACTACTGAACAGCCAACAATCAAAAGATACTCAATTGCTTGGGATATGGGGCATGGGAGGGATTGGCAAAACAACCATTGTAAAGCTGCTTATAATAAAATCTGTCACGATTTTGAGGCAAAGAGCTTCCTCCTGA 2235 0.3897 MASSSSFSINQDSESISNNDVFLSFCDKDTGNSFASYLYTALTVAGIVVFRDDGKLPNQDQMITLRPSVLHAIESSRISIIVFSKNYAHSTLCLQEFEKITECSGTIDQTVVPVFYDVDSSDGCHHETMIGEAFKDFAQRISKKDQSSEGRNISGFNVDSRDEGEDIRKVVNHVTNLLDRTYLFVAEYPVGVDSHVQHVIQLLNIQQSKDTLLLGIWGRGGIGKTTTAKAVYNKISRDFEANSFLPNVWEVWAQDNGGVSLQQQLLSDIYKTTKIEIDTVESGKVILQERLSQKKMFLVLDNVNNLDQLNTLCGSRKWFGEGSRIIITTRDVHLLRRLQVDHVYEMQEMYVSESLELFSWHAFKQPNPTEDFAELSKKVVNYYGGLPLALEVIGSFLLTRTRKTEWASVLYKLKRIPNGEVSKKLRISFDGLSDNMKEIFLHITFFCIGMDREDATKILEDLGHCVDEISALIRQSLVTVDQMNKIEMHDLLRDMGREIIRGKSTSVANERIYDVFLSFRGEDCRAKFISHLYTSLQNAGMYVFRDNDEIRRGDQISFSLLEAIGKSRISIVVLSSNYANSRWCLLELESIMESCRSGGLVVIPVFYEVDPSEVRHQNGKFGEGFKNLISGVSVVGRKMNWKTALLEIGGTAGVVVLNSRNESDDICKVVDHVTKLLGNTDLFVADHPVGVDSRVQDVIQLLNSQQSKDTQLLGIWGMGGIGKTTIVKLLIIKSVTILRQRASS 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03204 744 SUPERFAMILY Toll/Interleukin receptor TIR domain 505 628 IPR035897 -
Tsu07g03204 744 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 506 IPR044974 GO:0006952
Tsu07g03204 744 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 521 729 IPR044974 GO:0006952
Tsu07g03204 744 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 151 IPR035897 -
Tsu07g03204 744 ProSiteProfiles TIR domain profile. 511 677 IPR000157 GO:0007165
Tsu07g03204 744 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 521 729 - -
Tsu07g03204 744 Pfam NB-ARC domain 193 423 IPR002182 GO:0043531
Tsu07g03204 744 PRINTS Disease resistance protein signature 290 304 - -
Tsu07g03204 744 PRINTS Disease resistance protein signature 383 397 - -
Tsu07g03204 744 PRINTS Disease resistance protein signature 213 228 - -
Tsu07g03204 744 ProSiteProfiles TIR domain profile. 17 141 IPR000157 GO:0007165
Tsu07g03204 744 Pfam TIR domain 513 677 IPR000157 GO:0007165
Tsu07g03204 744 Pfam TIR domain 20 174 IPR000157 GO:0007165
Tsu07g03204 744 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 506 - -
Tsu07g03204 744 Gene3D - 507 679 IPR035897 -
Tsu07g03204 744 Gene3D - 16 179 IPR035897 -
Tsu07g03204 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 731 IPR027417 -
Tsu07g03204 744 Gene3D - 180 344 IPR027417 -
Tsu07g03204 744 Gene3D - 680 741 IPR027417 -
Tsu07g03204 744 Gene3D - 349 433 IPR042197 -
Tsu07g03204 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 443 IPR027417 -
Tsu07g03204 744 SMART till_3 512 651 IPR000157 GO:0007165
Tsu07g03204 744 SMART till_3 18 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03204 Tsu-Chr7 38080518 38084026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03204 190 500 WRKY Transcription Factor Family AT5G45050 33.228 7.04e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03204 - - mtr:MTR_7g088950 821.231