Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03203 ATGGTTGCATCAGGGAAAGTGATATTACAAGAAAGACTTCACCAGAAGAAGATATTTCTTGTGCTTGACGATGTGAATAAAGTGGAGCAATTGAATGCTTTGTGCGGAAGTCACGAATGGTTTGGTCAAGGAAGCAGAATAATCATCACAACAAGAGATGATGATTTACTTGGTAAGCTTGAAGTTCACCATAGATATAGAATGAAAGCAATGGGTGACAATGAATCTCTTGAGCTTTTTAGTTGGCATTCATTCAAGCAACCAAATCCTGTCGAAGGTTTTGCTGACCTTTCTAGAGATGTTGTTAAGTACTCTGGAGGATTGCCACTGGCTCTTCAAGTCATTGGGTCCTTTTTGTCGACCAGGAAAAGGAAAACAGAGTGGAAGAGTGTATTGGAGAAACTGAAACTCATTCCCAATAGCAAAGTTTTAGAGAAGCTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATGTGCAAGCAATATTCCTTGATATTGCTTTTTTCTTTATTGGGATGGACCAAGAAGATGTAACTTCGATATTGGCAGATTGTGGGCATTATGCAGTTACTGGAATAAGTGTCCTTGTACAACAAAGCCTTATAACTGTTGATCGAAAGAACAAGATTGGAATGCATGATTTGCTACGTGACATGGGAAGAGAGATTGTACGTAAGAAATCAATAGAGGGAGGCAAGGAGCCTAGTAGGTTATGGCATTACGAAGATGTTAAATATGTGTTGTCAAAAGATGCTAAAACTTTAGATGTTAAGGGACTGACTTTAAAGATGTCAAGAATGGACTCCACAACTTGTTTGGAAACTAAATCTTTTGAGAAGATGGATAAGCTTAGATTGCTTCAGCTTGCCGGGGTACAACTTGATGGAAATTACAAATATCTTTCAAGTGATATTCGATGGCTTTGTTGGCATGGATTTGCTTTAAAATATACACCAGCAGAGTTTCATCAAGAATGTTTAGTTGCTTTTGACTTCAAATATTCCAATCTGGAACGAGTGTGGAAGAAATCCCAGTTTCTGAAGGAGCTGAAATTTGTTAATCTTAGTCATTCTCATAACTTGAGACAAACCCCAAACTTTTCAAACTTGCCAAATCTTGTAAAGTTAATACTCAAAGATTGTCCAAGTTTGTCCACAATTTCTCCTACTATAGGACATCTCAAGaaaattcttttaataaatttgaaagaTTGTACCGGCCTTTGTGAACTTCCGAGAAGCATCTATAAATTAGAGTCGGTAAAAACTCTCATTGTGTCTGGATGTACAAAAATTGACAAGTTGGAGGAGGACATAGAACAGATGACATCTTTGACCACCCTGGCTGCAGATAACACTGCTATAACAAAAGTGCCCTTTGCAGTAGTAAGATCAAAGAGTATTGGATATATTTCTCTGTGTGGCTATAAAGGATTCTCGCATATTGTGTTTCCTTCGATTATTCAGTCTTGGATGTCTCCAACAAATGGTATCTTGTCCTTAGTTCAAACATTTGGAGGCTCATCATCTCTTGAATTCTTAGATGAGCAAAATGATAGTTTCTATGGTCTACCATCTATTTTCAAAGATCTTCAGACTCTTCAACGTCTTTGGCTGAAATGCGAGTCAGAAGCTCAACTAAATCAAACTCTAGCAGGTATTCTGGATAACTTACATACCATAAGTTGTGAGGAATTAGAAACAATGCAAAACACACCACAATCCTCAAATTTTGTGACTTCAGCATCCACTCATTGTTGCAGTCAAGTTCAAAGTTCAAGCTCACAACATTCCTTGACATCACTTTTAATTCAAATGGGAATGAACTGTCATGTCACTGATACTCTTAGACAAAACATTTTACAGAAAATGCCTCCCAATGGGTCTGGTTTCCTCCCTGGTGACAATTATCCTGATTGGCTAGCCTTCAATGACAGCGGTTGTTCTGTAACTTTTGAAGTACCTCATGTGGATGAGCGCACTTTGAAAACAATCATGTGCGTTGTCTATTCTTCTTCTCCAGATGATATAACATCAGAAGGCCTTCAAGTTTTGTTGGTGATAAATTACACAAAGAACACCATTCAGCTCTATAAGAGAGACGGATTATCAGCTTCCTCTGACGAAGAGGAGTGGCAGAATGTAGTATCAAATACAGAACCAGGTGACATAATGAagattattgttgtttttgaaaacaaatttatcgTGAAGAAGACAACTGTTTATCTTATCTATGATGAACCAATTGATGAAATGACGAACCACCGCCTTGAGTCAGATAAGAATGATTCTAACAAACGAAGAAGTTTAAGGAAATGGCACCCCAGAGCTCTCAAGGATTCTGTAATCCAGTATATCAAGGGACGAAGTTACTTTGGGTGA 2385 0.3723 MVASGKVILQERLHQKKIFLVLDDVNKVEQLNALCGSHEWFGQGSRIIITTRDDDLLGKLEVHHRYRMKAMGDNESLELFSWHSFKQPNPVEGFADLSRDVVKYSGGLPLALQVIGSFLSTRKRKTEWKSVLEKLKLIPNSKVLEKLRISFDGLSDDDVQAIFLDIAFFFIGMDQEDVTSILADCGHYAVTGISVLVQQSLITVDRKNKIGMHDLLRDMGREIVRKKSIEGGKEPSRLWHYEDVKYVLSKDAKTLDVKGLTLKMSRMDSTTCLETKSFEKMDKLRLLQLAGVQLDGNYKYLSSDIRWLCWHGFALKYTPAEFHQECLVAFDFKYSNLERVWKKSQFLKELKFVNLSHSHNLRQTPNFSNLPNLVKLILKDCPSLSTISPTIGHLKKILLINLKDCTGLCELPRSIYKLESVKTLIVSGCTKIDKLEEDIEQMTSLTTLAADNTAITKVPFAVVRSKSIGYISLCGYKGFSHIVFPSIIQSWMSPTNGILSLVQTFGGSSSLEFLDEQNDSFYGLPSIFKDLQTLQRLWLKCESEAQLNQTLAGILDNLHTISCEELETMQNTPQSSNFVTSASTHCCSQVQSSSSQHSLTSLLIQMGMNCHVTDTLRQNILQKMPPNGSGFLPGDNYPDWLAFNDSGCSVTFEVPHVDERTLKTIMCVVYSSSPDDITSEGLQVLLVINYTKNTIQLYKRDGLSASSDEEEWQNVVSNTEPGDIMKIIVVFENKFIVKKTTVYLIYDEPIDEMTNHRLESDKNDSNKRRSLRKWHPRALKDSVIQYIKGRSYFG 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03203 794 Gene3D - 2 64 IPR027417 -
Tsu07g03203 794 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 746 IPR044974 GO:0006952
Tsu07g03203 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 166 IPR027417 -
Tsu07g03203 794 PRINTS Disease resistance protein signature 12 26 - -
Tsu07g03203 794 PRINTS Disease resistance protein signature 105 119 - -
Tsu07g03203 794 PRINTS Disease resistance protein signature 368 384 - -
Tsu07g03203 794 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 746 - -
Tsu07g03203 794 SUPERFAMILY L domain-like 212 565 - -
Tsu07g03203 794 Gene3D - 71 155 IPR042197 -
Tsu07g03203 794 Gene3D Ribonuclease Inhibitor 253 434 IPR032675 -
Tsu07g03203 794 Gene3D Ribonuclease Inhibitor 435 625 IPR032675 -
Tsu07g03203 794 Pfam NB-ARC domain 9 136 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03203 Tsu-Chr7 38074496 38080422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03203 8 462 WRKY Transcription Factor Family AT4G12020 32.909 1.35e-56 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03203 - - mtr:MTR_7g088950 1214.91