Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03202 ATGGCTTCTTCCGGTTCTTCTTCCACAAACCAGGATTCTGAACCCATATTTAGCCATGATATGAATCGAAGCTCGATCTATGATGTGTTTTTGAGTTTCTATGACGTAGACACTGGTGATTCTTTTCCATCATATCTTTATACTGCTCTTAGAGAGGCTGCAATTTATgttaagctaattgaagtgtttcgGGTTGGCTTCAGTTCAGTTTCATCATCATCTGCAGAACAATCATTCAGTTTCACTCTCTTAATCTTCATGGCTTCTTCCAGTTCTTCTTCCACAAACCAGGATTCTGAATCCATATTTAACAATGATATGAATCAAAGTTGGACCTATGATGTTTTTTTGAGTTTCTGTGACAAAGACACTGCTGATTCTTTTGCATCATATCTTTATACTGCTCTCACAGTCGCTGGAGTTGTTGTTTTCAGAGATGGCGACAACCTTAGTAATCAAGATCAGGCACCCTCAAACTCAGTTCTGCATGCAATTGAAAGTTCTAGAATTTCTattgtcattttctcaaaaaagTATGCTGATTCAACATGGTGCTTGCAAGAGTTGGACAAAATAATGGAATGTTACAAAACCAAAGGTCAGAAGGTTGTGCCTGTGTTCTATGATGTGAATCCCTCTAGTGTACTTCATCAGGAAGGTATGCTTGGAGAAGCTTTTAAAGATCTCAAACAAAGAATCTTGAACAAAGATGAGTTTCTTCGTGAACTTGGCAACATTTCAGGATTTACCGTGGATTCCAGGAATGAAAGCAAAGATATAAAGAGTATAGTTCAACATGCAACTCGTTTGCTAGACAAGACATACTTGTTCGTTGCTGACTATCCGGTAGGATTAGAATCTCGACTGCAAGATGTGATTCAACTGCTGGACAACAAACAGCCAGAACATACTCTAATTGTAGGGATTTGTGGGCAAGGAGGGAGTGGCAAAACAACCATGGCAAAGGCCATTTATAATCGGATGGGTTGCAATTTTGAGGCTAAAAGCATCCTACTGAATGTTAGTCATGTTTGCGATCAGATTAATGGCCATGCGTCTTTACGAGAACAACTTCTTTCAGATATCTACAAAGGAACAAAAATAAAGCCAAATACAATGgaattagataaaaataaaagacttaTATTAAATGAAAGACTTCCCAGAAGAAAGATATTTCTTGTACTTGATGACGTGTGGAACTTGGACGAATGCTTTGATTTGTGTGGGAGCCGGGAATGGCTTGGTCAAGGAAGCAGAATAATAATCACATCAGGAGATAAACAATTACTTCATGAACTTGGTGCTGACTCTGTATATACAATAACACCTTTGTGCATCAATGAATCTCTTGAGCTTTTAAGCTGGCATGCATTCAAGCAACCAAGTGTTGTCGAAGGTTTTTCTGACGTTTCTAGACATGTTGCTGAGTACTGTCAGGGAGTACCATTATATCTTGAAATCATCGGGTCCTTTTTATCAACCAGGAGAAGAAAACCAGAGTGGGAAAGTGTTCTGCAGAAACTAGCAACCATTTCCAACACTGATCCAacgataatgatgatgatattgagaATAATTTATGATGGTTTAAGCGATAATGATGTTAAAGAAATATTCTTTGATATATCTTTTAACTTATCTGGGATGGACCGGGATGATGTAATTCAGATACTAAAAGAGGGTGGACATTCCGCAGAAAATGGATTAGGTGTCCTTTTACAACAAAGACTTGTAACTGTAGATAGCAAGAACAGGATTGAAATGCATGATTTGGTAAAAATTTGGGGAAGAGCAATCATAGGGGAAAAATCACAGGGTACGGCTGAGgaAAGAATCTACGATGTGTTTTTGAGTTTCAGAGGGGAAGATTGTCGTGCAAAATTCATTTCACATCTCTATGCCTCTCTTCAAAATGCCGGGATTTATGTTTTCAAAGACGATGATGGGATTCAACGAGGAGATACGATCTCACTCTCACTTATTGAAGCAATTGGAAAGTCTAGAATGTGTATCGTTGTTTTGTCTAGTAATTATGCTAATTCAAGATCGTGTTTGCTAGAGTTAGAGAAAATCATGAACAGTGCTAGAAGCGGGGGTCTGGTGGTTATACCAGTGTTCTATGAGGTAGATCCCTCAGAAGTACGACATCAAACAGGCAAGTTCGGAGAAGCTTTTGAAAATCTCACATCAAGAATCTCACGAGATAAATATAGGAAGTCGATTTGGGAAACAGCGCTCCTTGAAATCGGCGGCACAGCAGGGATTGTCATCGTAAATTCCAgGAGCGAAAGTGAGGACATCACGAATGTAGTAGACAATGTTACTGAGTTACTAGACAGAACAGACTTATTCATTGCAGACCATCCAGTGGGAGTTGAATCTCGTGTACAAGATGTTATTCAACAACTGAAAAGCCAACAATCAAAAGATTCTCTACTGATTGGGATATGGGGCATGGGAGGGATTGGCAAAACAACCATTGCTAAAGCCGTTTATAATGAAATTCGTCACGATTATGAAGCAAAGAGCTTCCTCCTAAATGTCAGGGAAGTTTGGGAACAAGATAATGGGGAAGTTTCTCTACAACAACGACTTCTTTCTGATATCTTCAAAACAACTAAAATAAAGATAGGTACAGTTGAATCGGGAAAAATGATATTGCATAAAAGACTTAGCCAGAAAAGGATATTTCTTGTGTTGGACGATGTAAATAAACTGGACCAATTGAATGCTTTGTGCGGAAGTCGCGAATGGTTTGGTCAAGGAAGTACAATAATTATCACAACAAGAGATGATGATTTACTTCTTAGGCTTAAAGTTGACCATGTGTATAGATTGAAAGAAATGGATGGCAATGAGTCTCTTGAGCTTTTTAGTTGGAATGCATTCAAGCAACCAATTCCCATTGAAGGTTTTGCTGAcctttgtagagattttgttaAGTACTCTGGTGGATTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGATGActaggagaagaaaaaaagagtggAAGAGTGTTTTGGAGAAACTCAAACTCATTCCCAATGAGAAAGTGTTAGGGAAACTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATATCAAAGAAATATTCCTTGacatttctttcttctttattGGGATGGACCGGGAAGATGTAATTAAAATATTGGACGACTGTGGGCATTATGCAGATATTGGAATAAGTGTCCTTGTACAAAGAAGTCTTGTAACTGTTGATAGGAATAACAAGATTGGAATGCATGATTTGCTACAAGACATGGGAAGAGAGATCGTCAGTAAGAAATCAACAGAGGGAAACAAGGAACCTAGTAGGTTATGGCGTTATGAGGAATTGAATTCTGCGTTGTCAAAAGATACCAGAACTTTAGATGTTAAGGGGCTGACTTTAAAGATTTCAAGAACGGACTCCACATCTTGTTTGGAAACTAAACCATTTCAGAAGATGGATAAACTTAAATTGCTTCAACTTGCTGGCGTACGCCTTAATGGAGATTACAAATATCTTTCAAAAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTAAAATGTACACCAGCAGACTTTTATCAAGAACATTTAATTACTGTTGACTTAAAATATTCCAATCTGGAACAAGTGTGGAAGAAGTCCCAGTTTCTGAAGAAGCTGAAATTTCTTAATCTTAGTCATTCTCATAACTTGAAACAAACCCCAGACTTTTCAAACTTGCCGAATCTTGAAAAGTTAATGCTAAAAGATTGTCCATGTTTGTCCTCAGTTTCTCCTACTATAGGACATCTCAAGaaaattcttttaataaatCTGAAAGACTGTACAGGCCTTCGTGAACTTCCGAGAAGCATCTATAAATTAGAATCATTAAAAACTCTCATTGTGTCTGGATGTAAAAACATTGACAAGTTGGAAGAGGACATAGAACAGATGACATCTTTGACCACCCTGGCTGCAGATAACACTGCTATAACAAGAGTGCCCTTTGCAGTAGTAAGATCAAAGAGCATCGGATATATTTCACTGTGTGGATTCAAAGGATTTGCACGTAATGTGTTTCCTTCGATTATTCAGTCTTGGATGTCTCCAACAAATGGTGTCTTGTCCTTAGTTCAAACATTTGCAGGCACATCATCTCTTGAATTCTTAGATGAACAAAATGATAGTTTCTATGGTTTACCATCTATTTTTAAAGATCTTCAGGATCTTCAACGTCTTTGGCTGAAATTCGATTCAGAAGTTCAACTAAATCAAACTCTTGCAAATATACTGCATAACTTACAAACCAGAAGTTGTGAGGAATTAGAAACAATGCAAAACACACCACAATCCTCAAATTTTGTGACTTCAGCATCCACTCATTGTTGCAGTCAAGTTCAAAGTTCAAGCTCACAAAATTCCTTGACATCACTTTTAATTCAAATGGGAATGAATTGTCATGTCACTGATACTCTTAGACAAAACATTTTACAGAAAATGCCTCCCAAAGGTTCTGGTTTACTCCCTGGTGACAATTATCCTGATTGGCTATCCTTCTATGATAATGGTTCTTCTGTAACTTTTGAAGTACCACAAGTGGATGAGTGCAGTTTGAAAACAATCATGTGTGTTGTCTATTCTTCTCCAGATGATATAACATCAGAATGCCTTAAAGTTTTGTTGGTGATAAATTGCACAAAGAACACCGTTCAGCTCTATAAGAGAGACGGATTAGCAGCCACCGCTGATGAAGAGGAGTGGCAGAAAGTAGTATCAAATATAGAACCAGGTGACATAGTGAGGGTGATTGttgtttttgaaaacaaatttgttGTGAAGAAGACAACAGTTTATCTTATCTATGATGAACCAATTGACGGAAAGACAAAGCACTGTCTTGAGTCGGATAAGAATATATTTGGTAGACTCTTATTCAGACTTCCTCCCATTGTTCGAGCCGTTCTGATTTCACGACCTTTCTGGTTCTGTTTGGCTGTTATTATGGTTTGGTGGTCTCGCTTCCATTCTAACAAACGAAGAAGTTTAAGGAAATGGCACCCCACAGCTCTCAAGGATGCTGCAATCCAGTATTTCAAGGGACGAAATTACTTTGGGTGA 5127 0.3692 MASSGSSSTNQDSEPIFSHDMNRSSIYDVFLSFYDVDTGDSFPSYLYTALREAAIYVKLIEVFRVGFSSVSSSSAEQSFSFTLLIFMASSSSSSTNQDSESIFNNDMNQSWTYDVFLSFCDKDTADSFASYLYTALTVAGVVVFRDGDNLSNQDQAPSNSVLHAIESSRISIVIFSKKYADSTWCLQELDKIMECYKTKGQKVVPVFYDVNPSSVLHQEGMLGEAFKDLKQRILNKDEFLRELGNISGFTVDSRNESKDIKSIVQHATRLLDKTYLFVADYPVGLESRLQDVIQLLDNKQPEHTLIVGICGQGGSGKTTMAKAIYNRMGCNFEAKSILLNVSHVCDQINGHASLREQLLSDIYKGTKIKPNTMELDKNKRLILNERLPRRKIFLVLDDVWNLDECFDLCGSREWLGQGSRIIITSGDKQLLHELGADSVYTITPLCINESLELLSWHAFKQPSVVEGFSDVSRHVAEYCQGVPLYLEIIGSFLSTRRRKPEWESVLQKLATISNTDPTIMMMILRIIYDGLSDNDVKEIFFDISFNLSGMDRDDVIQILKEGGHSAENGLGVLLQQRLVTVDSKNRIEMHDLVKIWGRAIIGEKSQGTAEERIYDVFLSFRGEDCRAKFISHLYASLQNAGIYVFKDDDGIQRGDTISLSLIEAIGKSRMCIVVLSSNYANSRSCLLELEKIMNSARSGGLVVIPVFYEVDPSEVRHQTGKFGEAFENLTSRISRDKYRKSIWETALLEIGGTAGIVIVNSRSESEDITNVVDNVTELLDRTDLFIADHPVGVESRVQDVIQQLKSQQSKDSLLIGIWGMGGIGKTTIAKAVYNEIRHDYEAKSFLLNVREVWEQDNGEVSLQQRLLSDIFKTTKIKIGTVESGKMILHKRLSQKRIFLVLDDVNKLDQLNALCGSREWFGQGSTIIITTRDDDLLLRLKVDHVYRLKEMDGNESLELFSWNAFKQPIPIEGFADLCRDFVKYSGGLPLALQVIGSFLMTRRRKKEWKSVLEKLKLIPNEKVLGKLRISFDGLSDDDIKEIFLDISFFFIGMDREDVIKILDDCGHYADIGISVLVQRSLVTVDRNNKIGMHDLLQDMGREIVSKKSTEGNKEPSRLWRYEELNSALSKDTRTLDVKGLTLKISRTDSTSCLETKPFQKMDKLKLLQLAGVRLNGDYKYLSKDLRWLCWHGFPLKCTPADFYQEHLITVDLKYSNLEQVWKKSQFLKKLKFLNLSHSHNLKQTPDFSNLPNLEKLMLKDCPCLSSVSPTIGHLKKILLINLKDCTGLRELPRSIYKLESLKTLIVSGCKNIDKLEEDIEQMTSLTTLAADNTAITRVPFAVVRSKSIGYISLCGFKGFARNVFPSIIQSWMSPTNGVLSLVQTFAGTSSLEFLDEQNDSFYGLPSIFKDLQDLQRLWLKFDSEVQLNQTLANILHNLQTRSCEELETMQNTPQSSNFVTSASTHCCSQVQSSSSQNSLTSLLIQMGMNCHVTDTLRQNILQKMPPKGSGLLPGDNYPDWLSFYDNGSSVTFEVPQVDECSLKTIMCVVYSSPDDITSECLKVLLVINCTKNTVQLYKRDGLAATADEEEWQKVVSNIEPGDIVRVIVVFENKFVVKKTTVYLIYDEPIDGKTKHCLESDKNIFGRLLFRLPPIVRAVLISRPFWFCLAVIMVWWSRFHSNKRRSLRKWHPTALKDAAIQYFKGRNYFG 1708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03202 1708 ProSiteProfiles TIR domain profile. 612 779 IPR000157 GO:0007165
Tsu07g03202 1708 SUPERFAMILY "Winged helix" DNA-binding domain 521 606 IPR036390 -
Tsu07g03202 1708 Gene3D - 106 277 IPR035897 -
Tsu07g03202 1708 Gene3D - 611 779 IPR035897 -
Tsu07g03202 1708 PRINTS Disease resistance protein signature 891 905 - -
Tsu07g03202 1708 PRINTS Disease resistance protein signature 814 829 - -
Tsu07g03202 1708 PRINTS Disease resistance protein signature 984 998 - -
Tsu07g03202 1708 PRINTS Disease resistance protein signature 1224 1240 - -
Tsu07g03202 1708 Gene3D - 278 438 IPR027417 -
Tsu07g03202 1708 Gene3D - 780 944 IPR027417 -
Tsu07g03202 1708 SUPERFAMILY Toll/Interleukin receptor TIR domain 103 230 IPR035897 -
Tsu07g03202 1708 Gene3D - 445 532 IPR042197 -
Tsu07g03202 1708 Gene3D - 950 1034 IPR042197 -
Tsu07g03202 1708 SUPERFAMILY L domain-like 1091 1431 - -
Tsu07g03202 1708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 543 IPR027417 -
Tsu07g03202 1708 SUPERFAMILY Toll/Interleukin receptor TIR domain 610 745 IPR035897 -
Tsu07g03202 1708 SMART till_3 112 254 IPR000157 GO:0007165
Tsu07g03202 1708 SMART till_3 613 753 IPR000157 GO:0007165
Tsu07g03202 1708 CDD AAA 283 391 - -
Tsu07g03202 1708 Pfam TIR domain 113 266 IPR000157 GO:0007165
Tsu07g03202 1708 Pfam TIR domain 614 775 IPR000157 GO:0007165
Tsu07g03202 1708 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 121 612 - -
Tsu07g03202 1708 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 622 1623 - -
Tsu07g03202 1708 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 121 612 IPR044974 GO:0006952
Tsu07g03202 1708 SMART AAA_5 811 951 IPR003593 -
Tsu07g03202 1708 SMART AAA_5 303 445 IPR003593 -
Tsu07g03202 1708 Gene3D Ribonuclease Inhibitor 1118 1501 IPR032675 -
Tsu07g03202 1708 ProSiteProfiles TIR domain profile. 111 271 IPR000157 GO:0007165
Tsu07g03202 1708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 1045 IPR027417 -
Tsu07g03202 1708 Pfam NB-ARC domain 794 1015 IPR002182 GO:0043531
Tsu07g03202 1708 Pfam NB-ARC domain 287 528 IPR002182 GO:0043531
Tsu07g03202 1708 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 622 1623 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03202 Tsu-Chr7 38049251 38073874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03202 113 612 WRKY Transcription Factor Family AT4G12020 26.190 2.82e-38 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03202 - - mtr:MTR_7g088950 2132.07