Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03196 atggaaggagATAAGTGTTGTTCAAGTTTTTTTCAAAGATGCAAGCCTTACATAGCTATGATTTCTCTACAATTTGGTTTTGCTGGTATGAACATAATCACAAAGGTTTCACTCAACCGAGGAATGAGTCACTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACTGCTGCTATTGCTCCTTTTGCTATAGTTCTTGAGAGGAAGATAAGGCCAAGGATTACATTTCTTATGTTCATGCAAATGTTTGTGCTCGGACTCCTCGGgccTGTGATTGATCAGAACCTATACTATGCTGGGTTGAAATTCACATCCCCAACTTACTCATGTGCTATTAGCAATGTTCTCCCTGCAATGACATTTGTTATGGCAGTTATTTTCAGGATGGAGAAATTggacattaaaaaattaagatgCCAAGTAAAGGTGATTGGAACTATAATTACAGTTGCTGGGGCCATGGTGATGACATTATACAAAGGACAAGTTATTAATATATTAGGATCTCAATACATGCATCATCCTAGAAATTATGTTCCTGAAAACACTACTGATTCTGGTGAAAAAGATTGGTTTAAGGGTTCTGTTTTTCTCATAATTGCTACATTTGCTTGGGCTTCTTTCTTCATTCTTCAGGCTGTGACATTAAAGCAATATTCAGCTCAACTCTCACTTACAGCCATAGTGTGTTTCTTGGGCACACTTCAATCAATTGCTGTTACCTATGTTATGGAACATAACCCAAATGTTTGGAACATTGGTTGGGACATGAACCTATTAGCTGCAGCCTATGCTGGTATAATATCATCAGGTCTTACATACTATGTTCAAGGGGTAGTGATGCAAAAGAAAGGGCCAGTTTTTGTCACTGCTTTTAGTCCTTTGATGATGATCATAGTGGCAATAATGGGCACTTTCATCCTTgcagaaaaattatatattggaGGTGTTATTGGAGCAATTTTGATTGTAATAGGACTATACTCAGTTCTATGGggcaaaaacaaagaaaacaaagagatTGAAGAAGAGACAATAATTGAGGAAATTAAGTGTTGTAGAGAAAATGGAGTGATGGAAACAGTGATTGAAGGTGTTGAAACAAATGACATTGAGATGCAAAATGGTGAAGCTAATAGTAAAGTATTAAGGGTAACAATTATTAGTGTTCCAAAAGTATAA 1182 0.3418 MEGDKCCSSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNVLPAMTFVMAVIFRMEKLDIKKLRCQVKVIGTIITVAGAMVMTLYKGQVINILGSQYMHHPRNYVPENTTDSGEKDWFKGSVFLIIATFAWASFFILQAVTLKQYSAQLSLTAIVCFLGTLQSIAVTYVMEHNPNVWNIGWDMNLLAAAYAGIISSGLTYYVQGVVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYIGGVIGAILIVIGLYSVLWGKNKENKEIEEETIIEEIKCCRENGVMETVIEGVETNDIEMQNGEANSKVLRVTIISVPKV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03196 393 PANTHER WAT1-RELATED PROTEIN 10 368 - -
Tsu07g03196 393 PANTHER WAT1-RELATED PROTEIN 10 368 IPR030184 GO:0016021|GO:0022857
Tsu07g03196 393 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Tsu07g03196 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Tsu07g03196 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Tsu07g03196 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03196 Tsu-Chr7 37957828 37961058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03196 1 391 Nodulin-like Gene Family AT5G07050 61.519 2.91e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03196 - - gmx:100793545 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03196 07 37957828 37961058 Tsu07g03196 07 37957828 37961058 ECH