Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03191 ATGACACTCTCTCCCCAAAATGAACTCAAAATTCAAGACTCAGAATTTCTATTCAAAGAAATTGGAAATGAAGGTCTCACTAAACAGATTCTCAGAAAAGGTGTTACTTGGCAAACTCCATTTTCTGGTGACCAAGTTCAAGttCATTTCAGTGGACAAGTTGAAAATGGACCATCTCTTGAATCCAGTTATGATAAAGGGTCGCCGTTTCATTTCAAATTAGGCCAAGgggaagttatcaaaggttggGATGAAGGAGTTGCTACAATGAAGAAAGGGGAGAGAGCAGTCTTCAAAATACCACCTAACTTAGCATATGGCGAAGTAGGTTCTCCACCGTTGATTCCTCCGAATGCGATTCTCATTTTTGAGATTGAAATGTTGGGTTGGAGTACCATTAGGGACTTGACTGGTGATGGAGGAATCATGAAAAAGACAATAAGGGAAGGAGAAGGATGGGCTACTCCAAAAGAGCTTGATGAAGTGCTAGTGAAATATGAAGCAAGGCTTGAAAATGGGATGCTTATCAAGTCTGATAAAGGTGTAGAGTTTAATGTAAGTGATGGCTATCTTTGTCCAGCAATGAGCATAGCAGTAAAGACGATGAGAAAAGGCGAGGTAGCAGAGCTAAGTATGAAATTCTTTTATGGACTTATTAGTCAAAATTCAAATCGAATCATTGAGCTTGATGGTTTACCAGATTCTAATTTAATTAGTATCAAACTTGAGTTGGTATCATGGAAAATTGTTACTGATATCACAGGAGACAAGAGAATACTGAAAAAAGTTAATAAAGCCGGCGAGGGGCATGATCGTCCTAACGAAGGATCTCATGTGAAAGTCATATATTTATGTAAAGGAGAAAATGGTACAATTATTGAGAGGAAAGGGTCAAAGGAAGAACCTTTTGAGTTCACAACTCAAGAAgAACAAGTGTATGAGGGTCTAGAAAAAGCAATAATGACAATGAAAAAAGCAGAACAAGCTTTGGTGACTGTCAATGCTGAATATTTGTGTGACCATAGTAGTAATTTGCAAGGAAACAAggccaataataataaaatttattatgaaGTTGAATTGATTGATTTCACTAAGGAGAAGCCATTTTGGAAAATGGACACTCAAGAGAAACTAGAAGCTTGTGAGCAAAAGAAGTATGATGGAAATCTTCTGTTCAAGGCTCACAATTTTAGTCGCGCATCCAAGAAATATGAAAAGGCCGTAAAATACATTGAATTTGATCACACATTTAGCGAAGACGAGAAGCTTCATGCTAACACCTTGAGATTATCGTGTAATTTGAACAATGCTGCTTGTAAACTTAAATTGGAGGAGTACATTGAAGCTGCAAGGTTATGCACAAAGGTCCTAGAACAAGATCCCTTAAATGTGAAGGCTCTTTATAGAAGATGCCAAGCATACCTTAAAACATCAGACTTGGAGAAAGCTGAAGCTGATATTAAAAGAGCTTTGATTATTGATCCAAATAACAGAGACATTAAACTTGAATACAAAGAGCTCAAACTGAAGCAAAAGgaatataataaatatgaagCTGATATCTTTAGCACAATGGTTTCAAAGATGAATTAG 1596 0.3565 MTLSPQNELKIQDSEFLFKEIGNEGLTKQILRKGVTWQTPFSGDQVQVHFSGQVENGPSLESSYDKGSPFHFKLGQGEVIKGWDEGVATMKKGERAVFKIPPNLAYGEVGSPPLIPPNAILIFEIEMLGWSTIRDLTGDGGIMKKTIREGEGWATPKELDEVLVKYEARLENGMLIKSDKGVEFNVSDGYLCPAMSIAVKTMRKGEVAELSMKFFYGLISQNSNRIIELDGLPDSNLISIKLELVSWKIVTDITGDKRILKKVNKAGEGHDRPNEGSHVKVIYLCKGENGTIIERKGSKEEPFEFTTQEEQVYEGLEKAIMTMKKAEQALVTVNAEYLCDHSSNLQGNKANNNKIYYEVELIDFTKEKPFWKMDTQEKLEACEQKKYDGNLLFKAHNFSRASKKYEKAVKYIEFDHTFSEDEKLHANTLRLSCNLNNAACKLKLEEYIEAARLCTKVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKRALIIDPNNRDIKLEYKELKLKQKEYNKYEADIFSTMVSKMN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03191 531 SUPERFAMILY FKBP-like 245 385 - -
Tsu07g03191 531 PANTHER PEPTIDYLPROLYL ISOMERASE 250 362 - -
Tsu07g03191 531 PANTHER PEPTIDYLPROLYL ISOMERASE 5 251 - -
Tsu07g03191 531 PANTHER PEPTIDYLPROLYL ISOMERASE 356 531 - -
Tsu07g03191 531 SUPERFAMILY FKBP-like 22 131 - -
Tsu07g03191 531 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 43 131 IPR001179 GO:0003755
Tsu07g03191 531 Gene3D - 16 133 IPR046357 GO:0003755
Tsu07g03191 531 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 356 531 - -
Tsu07g03191 531 Gene3D - 134 248 IPR046357 GO:0003755
Tsu07g03191 531 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 276 365 IPR001179 GO:0003755
Tsu07g03191 531 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 159 248 IPR001179 GO:0003755
Tsu07g03191 531 SMART tpr_5 382 415 IPR019734 GO:0005515
Tsu07g03191 531 SMART tpr_5 465 498 IPR019734 GO:0005515
Tsu07g03191 531 SMART tpr_5 431 464 IPR019734 GO:0005515
Tsu07g03191 531 SUPERFAMILY TPR-like 373 528 IPR011990 GO:0005515
Tsu07g03191 531 SUPERFAMILY FKBP-like 136 217 - -
Tsu07g03191 531 Gene3D Tetratricopeptide repeat domain 368 525 IPR011990 GO:0005515
Tsu07g03191 531 ProSiteProfiles TPR repeat profile. 465 498 IPR019734 GO:0005515
Tsu07g03191 531 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 250 362 - -
Tsu07g03191 531 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 251 - -
Tsu07g03191 531 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 40 128 IPR001179 GO:0003755
Tsu07g03191 531 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 155 223 IPR001179 GO:0003755
Tsu07g03191 531 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 272 362 IPR001179 GO:0003755
Tsu07g03191 531 Coils Coil 316 336 - -
Tsu07g03191 531 Pfam Tetratricopeptide repeat 465 498 IPR001440 GO:0005515
Tsu07g03191 531 Gene3D - 249 367 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03191 Tsu-Chr7 37936189 37940407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03191 20 530 Calmodulin-binding Proteins AT5G48570 53.475 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03191 - - gmx:100785412 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03191 07 37936189 37940407 Tsu07g03191 07 37936189 37940407 ECH