Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03187 ATGAAGGAGGAGCGAGAGCCAAAACTTGAGAAGGAACCGGAGGCAATGCCACCAAGCTCTAAATCTGATGATGAGGATGTACTTTCTACGAGACTTGACATTCACACCAAGTCCACTTCCAAACCATGGGAGAATGGTGAACTTTCAAGTTCATCTTATAAAGCTACAGGTGAATCTTCATCTCAGAACACTACATGTGAACCTTTATCTAAGAATTATGTTACTGGTAAACCTTTATCTCAGAACGCTACTAATGAACCTTTACCTGAGCAGAAAATGAGGGAATTCCCTTGTCATTATTGTGACAAGAAATTTTCCACTTCTCAAGCATTTGGGGGGCACCAAAATACTCATAAGCGTGAGCGTGAATTCAAAAAGATGGAAGAACAAAGGAGAGAGGAACAAATGAATTCAACTATGAGATTTATTTCTACTAATCAATCTTACCTTTATCCATTTTCAAGCCCTATTCACTATCAAGGGTATTCTTATTTACGTAATGCTAACTTGACCCATCCAACTAGCGCCCATATGAACAATTAA 543 0.3867 MKEEREPKLEKEPEAMPPSSKSDDEDVLSTRLDIHTKSTSKPWENGELSSSSYKATGESSSQNTTCEPLSKNYVTGKPLSQNATNEPLPEQKMREFPCHYCDKKFSTSQAFGGHQNTHKREREFKKMEEQRREEQMNSTMRFISTNQSYLYPFSSPIHYQGYSYLRNANLTHPTSAHMNN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03187 180 MobiDBLite consensus disorder prediction 1 40 - -
Tsu07g03187 180 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Tsu07g03187 180 MobiDBLite consensus disorder prediction 41 88 - -
Tsu07g03187 180 MobiDBLite consensus disorder prediction 1 91 - -
Tsu07g03187 180 Gene3D Classic Zinc Finger 79 149 - -
Tsu07g03187 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Tsu07g03187 180 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 163 IPR044246 GO:0009788
Tsu07g03187 180 SUPERFAMILY beta-beta-alpha zinc fingers 94 125 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03187 Tsu-Chr7 37886664 37887206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03187 94 160 C2H2 Transcription Factor Family AT5G14010 43.284 3.69e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu07g03187 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03187 - - cam:101490368 129.798