Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03166 ATGGAGgaacgacaacaacaacaacagtgCCAGGTCATCACTATCGGAACCAATAATCCCCTCCTCCACGGCCCCTTCGCGCCTCGATCAGACGATGAAGACGACGATTCCGGCTGCGCCTATTCCAGAGCAGTCCTCGTGGTTGACATGGTCTGGAACCTCTCCTTCGTTGTGGTTGCCGCCGCTGTCATCCTCTCCACATTCGGCGAGCATCCTTCGACTCCTCTTAGACTTTGGCTCTGTGGTTACGCCTTAGAGTGCGTTCTCCATGTCGCTTTTGTTTTCTCTGAATATCGCTTCACTACTCGTGATTCCTTCTCTCATACTCCTTATAGCATTGCAAAGAAGTTAGAGCCTATGAATACTTTAGCATCATCTGTTTGGTGGGTGTTTGGATTTTATTGGATTGTTGTCGGTGGTCAACCACTTCTCGAAGATTCTCCTCGTCTATACTGGTTGACAGTGGTCTTTCTTGCCTTTGACgtattttttattatcttttgcATTGGGATGGCATGTATAGTTTTCTTCGCTCTCTTCTGCATCATCCCAATCATAGCATTAGCTTATGCTTTAAGAATAAGGGAAGGTGCTTCAGAAGATGATATCAGGTCACTTCCTATGTATAGGTTTAGTCAGTCAAATGTAATGGTTATGATTGATGACAACAAGAAGCAACTTGTTAAAGCAAGAACCGGTTCATACAATCAAAGCCATATCAGTGAACTATCTCTTCATCCAGATGATTCTGAATGTTGTATTTGCCTATGTCCATATGTTGATGGAACAGAACTGTATCGGCTTCCCTGTACCCACCATTTTCATTCTGCATGCATCAGCCGTTGGCTTCGGACTAAAGCAACTTGCCCGCTCTGCAAATTTAATATCCGAAGAGGCGATACATTGGTTTGA 912 0.4287 MEERQQQQQCQVITIGTNNPLLHGPFAPRSDDEDDDSGCAYSRAVLVVDMVWNLSFVVVAAAVILSTFGEHPSTPLRLWLCGYALECVLHVAFVFSEYRFTTRDSFSHTPYSIAKKLEPMNTLASSVWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYALRIREGASEDDIRSLPMYRFSQSNVMVMIDDNKKQLVKARTGSYNQSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHSACISRWLRTKATCPLCKFNIRRGDTLV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03166 303 PANTHER RING-FINGER UBIQUITIN LIGASE 30 303 - -
Tsu07g03166 303 SMART ring_2 252 292 IPR001841 -
Tsu07g03166 303 ProSiteProfiles Zinc finger RING-type profile. 252 293 IPR001841 -
Tsu07g03166 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 300 IPR013083 -
Tsu07g03166 303 Pfam Ring finger domain 251 293 IPR001841 -
Tsu07g03166 303 PANTHER TARGET OF ERK KINASE MPK-1 30 303 - -
Tsu07g03166 303 SUPERFAMILY RING/U-box 245 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03166 Tsu-Chr7 37605594 37609133 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03166 33 300 C3H Transcription Factor Family AT1G68070 44.599 7.23e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03166 - - gmx:100808066 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03166 07 37605594 37609133 Tsu07g03166 07 37605594 37609133 ECH