Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03162 ATGGAACATAATTTGGGTCAAGATTCGGTACCACCAGCTGATAAGTCTAGGGTTTTAAATGTGAAGCCATTGAGGACGCTTGTTCCTGTGTTCCCTTCACCGTCAAATCCTTCGTCGTCTTCAACTCCACAAGGCGGTGCTCCTTTTGTTTGTGTTTCTCCTGCAGGACCTTTCCCCTCTGGCGTTGCACCATTTTACCCTTTCTTTGTCTCGCCAGAGTCGCAGAGGCTTTCTGAACAACATGCACCGAATGCAACTCCTCAACGTGCCACACCAATATCGACTGCTGTTCCAATTAATTCATTCAAGACTCCAATTGCGGCGACAAATGGAGATGTGGGTTCTTCACGGAAGAATAAGGGGAGTCGCGGTGGACAACTCACAGGGGAAGATGGCTACAACAACGAAGTAATTGATTTAGAAGATGGAACTGGGGATGGGAGTTCAAAGCAGCGCAAGAAGAGGGGAAGGGCAAAGCGTGCCGGTGGTGCTGGTACTGATGGTAGTGGTGCCGGTGCGGTTTCTATTGAAGTTGATCTAGATGCTGTGGCTAATGACATTCTTCAATCAATTAACCCCATGGTTTTTGATGTGATAAATCATCCTGATGGTAGTAAGGATTCAGTTTCGTATACACTTATGATATATGAAGTGCTGCGAAGAAAGCTTGGACAAATTGAAGAGTCAACAAAGGATGCTAATTCTGGAGCGAAGCGGCCTGATTTGAAGGCAGGAACGGTTATGATGACTAAAGGGGTTAGGAGTAACAGCAAGAAAAGGATTGGAATTGTGCCTGGTGTTGAAGTTggagatattttctatttccGGTTTGAGATGTGCTTAGTGGGACTACATTCACCTTCCATGGCTGGAATTGATTATCTGGGTTCCAAAGCAAGTCAAGAGGAAGAGCCATTGGCTGTCAGTATTGTCTCATCAGGAGGTTATGAAGATAATACCGACGATGGAGATGTGCTAGTTTACAGTGGTCAAGGTGGAGTTAACCGTGACAAGGGAGCAAGTGATCAAAAACTTGAAAGGGGTAATCTTGCTTTGGAGAAGAGCATGCATAGAGGTAATGATGTGAGAGTAATTAGGGGTTTGAAGGATGTAATGCATCCAACTGGGAAGGTATATGTCTATGACGGTATGTACAGGATTCAAGACTCATGGGTAGAGAAAGCAAAATCCGGTTTCAATGTATTTAAGTATAAATTAGTAAGGGTGCCGGGACAACCTGCAGCATATACAATATGGAAATCTGTTCAACAATGGACTGATAAGTCGGTTCCAAGAACAGGGGTTATATTGCCTGATCTTACTTCTGGGGGTGAAAAAGTACCTGTTTGTCTCGTGAATGATGTTGATAATGAGAAGGGCCCTGCATATTTCACTTACATCCCTACTCTCAAGAATCCAAGGCCAGTTGCTCCTTTGGAGTCTTCTTCTGGATGTTCTTGTATTGGTGGTTGTCAACCTGGAAATTTTAACTGTCCCTGCATTCAAAAGAACGGAGGTTATCTCCCGTATTCTGCAGCCGGGTTAGTCGCAGACCTGAAATCTGTGATACATGAGTGTGGTCCTTCATGTCAGTGTCCCCCCACTTGCCGAAGCCGGGTCTCCCAAGGTGGCTTGAAATTTCGTTTGGAGGTGTTCAGAACCAACAATAAAGGGTGGGGTCTAAGATCGTGGGATGCTATTCGTGCTGGAACTTTTATATGCGAGTATGCGGGAGAAGTCATAGATAATGCTAGAGCTGAGATGCTTGGTggtgaaaatgatgatgaataCATTTTTGATTCTACTCGCATTTATCAGCAACTGGAAGTTTTTCCTGCTGACATTGAAGCTCCAAAGATCCCGTCTCCGCTGTATATAACAGCGAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTGTTGTGGCGTCCAATTGGGATACTTTTGTTAATTGTACTTAAGCTCTAG 1986 0.4381 MEHNLGQDSVPPADKSRVLNVKPLRTLVPVFPSPSNPSSSSTPQGGAPFVCVSPAGPFPSGVAPFYPFFVSPESQRLSEQHAPNATPQRATPISTAVPINSFKTPIAATNGDVGSSRKNKGSRGGQLTGEDGYNNEVIDLEDGTGDGSSKQRKKRGRAKRAGGAGTDGSGAGAVSIEVDLDAVANDILQSINPMVFDVINHPDGSKDSVSYTLMIYEVLRRKLGQIEESTKDANSGAKRPDLKAGTVMMTKGVRSNSKKRIGIVPGVEVGDIFYFRFEMCLVGLHSPSMAGIDYLGSKASQEEEPLAVSIVSSGGYEDNTDDGDVLVYSGQGGVNRDKGASDQKLERGNLALEKSMHRGNDVRVIRGLKDVMHPTGKVYVYDGMYRIQDSWVEKAKSGFNVFKYKLVRVPGQPAAYTIWKSVQQWTDKSVPRTGVILPDLTSGGEKVPVCLVNDVDNEKGPAYFTYIPTLKNPRPVAPLESSSGCSCIGGCQPGNFNCPCIQKNGGYLPYSAAGLVADLKSVIHECGPSCQCPPTCRSRVSQGGLKFRLEVFRTNNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGGENDDEYIFDSTRIYQQLEVFPADIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIGILLLIVLKL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03162 661 SUPERFAMILY PUA domain-like 244 426 IPR015947 -
Tsu07g03162 661 SUPERFAMILY SET domain 423 650 IPR046341 -
Tsu07g03162 661 MobiDBLite consensus disorder prediction 77 123 - -
Tsu07g03162 661 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 651 IPR025794 GO:0016571
Tsu07g03162 661 SMART G9a_1 257 412 IPR003105 -
Tsu07g03162 661 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 10 651 - -
Tsu07g03162 661 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 10 651 - -
Tsu07g03162 661 ProSiteProfiles SET domain profile. 547 661 IPR001214 GO:0005515
Tsu07g03162 661 SMART set_7 547 660 IPR001214 GO:0005515
Tsu07g03162 661 MobiDBLite consensus disorder prediction 77 171 - -
Tsu07g03162 661 Gene3D SET domain 417 653 IPR046341 -
Tsu07g03162 661 ProSiteProfiles YDG domain profile. 262 408 IPR003105 -
Tsu07g03162 661 Gene3D - 260 416 IPR036987 -
Tsu07g03162 661 Pfam SET domain 558 649 IPR001214 GO:0005515
Tsu07g03162 661 ProSiteProfiles Pre-SET domain profile. 483 544 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu07g03162 661 Pfam SAD/SRA domain 261 412 IPR003105 -
Tsu07g03162 661 Pfam Pre-SET motif 442 539 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu07g03162 661 SMART preset_2 437 531 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03162 Tsu-Chr7 37566043 37569471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03162 14 651 Su(var)3-9 homologs AT1G73100 47.158 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu07g03162 SAD_SRA 3.3e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03162 K24405 - gmx:100805932 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03162 07 37566043 37569471 Tsu07g03162 07 37566043 37569471 ECH