Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03157 ATGGAACGACGTAATAGGTTAGTTTTTGTATCAGATTTTGTTCTATCTTTCATGTGGGTATGTTCTGGTGTTCTTGTTAGGTTATTCGTTTTCAAAGTTCTTGGCTTTTCTCATACCCATATTGCTGAGATTGTCAAGATTTCATTTTCCATCCTCAACATGTTCTTCTTTGCTCTCCTTGGCAAGATTTCTCATGGTGGGGCCTACAATCCTCTCACTGTTTTGTCTGATGCTATCTCTGGAGATTTCCTTAACTTCCTTTTCTGCATTGCTTCTAGAATTCCTGCTCAGGTGTTTGGATCTATTGTTGGAGTTAGACTTCTTATTGAGACCATTCCTGAAGTAGGACAAGGACCACGTTTGAATGTTGACCTTCATCGGGGTGCATTGACAGAAGGATTACTAACATTTGCAATTGTAAGCATTTCACTTGGACTTGCCGCATCAAAAATCCATGGAAGTTTCTTCATGAAGACTTGGATTTCCAGCCTCTCCAAGTTAACACTTAATATACTTGGTTCTGATCTGACCGGTGGTGTTATGAACCCCGCATCAGTAATGGGATGGGCTTATGCTCGAGGCGATCACATAACAAAGGAGCACTTCCTTGTATACTGGCTTGCCCCTATAGAGGCAACTATTTTCGCAGTGTGGACATTCAAGTTCTTAGTCCGGCCAGTAATAGAAGGTAAAACAGGCACAAAACGTAAATCAGATTGA 720 0.4111 MERRNRLVFVSDFVLSFMWVCSGVLVRLFVFKVLGFSHTHIAEIVKISFSILNMFFFALLGKISHGGAYNPLTVLSDAISGDFLNFLFCIASRIPAQVFGSIVGVRLLIETIPEVGQGPRLNVDLHRGALTEGLLTFAIVSISLGLAASKIHGSFFMKTWISSLSKLTLNILGSDLTGGVMNPASVMGWAYARGDHITKEHFLVYWLAPIEATIFAVWTFKFLVRPVIEGKTGTKRKSD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03157 239 Pfam Major intrinsic protein 9 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g03157 239 Gene3D Glycerol uptake facilitator protein. 4 232 IPR023271 -
Tsu07g03157 239 SUPERFAMILY Aquaporin-like 8 229 IPR023271 -
Tsu07g03157 239 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g03157 239 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g03157 239 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g03157 239 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g03157 239 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g03157 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 IPR044226 GO:0015267
Tsu07g03157 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03157 Tsu-Chr7 37525450 37529359 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03157 10 239 Major Intrinsic Protein MIP AT3G56950 59.740 1.10e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03157 K09875 - gmx:100786138 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03157 07 37525450 37529359 Tsu07g03157 07 37525450 37529359 ECH