Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03082 ATGATGACTTCACAAAACTTCAACAATGGTGATATCAATATGACTCTTTTCCCATTATCTCCTAttcctccttcttcttctcattCTATGACAAATCCTGAAATGGGTCTTCAGATTTTGAGTCCTTCTTTGTTTCAGTCCAAAGAGATTAGGGAAACAAAGGAAGAAGATGTTTACTTTGGAGTTCATAGCAAAAACTTGTCTTTGAAACTTGGtgatgaagaaggagaagaaaaaagCTCTGTTTCTGTGAAGATTGGTTACTCCAAACTTTGTTCTAGAGGTCATTGGAGACCAGCTGAAGATGCAAAACTTAAGGAACTTGTTGCTGAATTTGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGATGGAAGATCAGGAAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTAGACCCAAGGATTAACAAAAGAACATTTTCTGAGGAGGAAGAGGAGAGACTTTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCTATGATTGCTAGACTTTTTCCAGGAAGAACAGATAATGCAGTGAAGAATCATTGGCATGTGATTATGGCTAGGAGACATAGGGAACAATGTAGCGTGTATAGAAGGAGAAAACCAGTTGTTGAAAGCTTTTCAAAGGGTTTGAAATTGAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGTACCATTGATGGAAATGCATCAGCTTGTACTAATCTTTCACTCACTCCTTCTTCAGCTAATCTAAGTACTCAACTGTTTGATAAACTCGTGGCTCCAATTCAGAATCACCAAGACTTTGGATCACTAATTATGGGTAAATCTAGAGAAAATGTGATTGCAACTAGGGATGTGAGTTTTGACAAATATTTTGGAGCTAGTAAGAAGCAAGAGCAAGTGGAAAAGCTAAAGGTAATAGATGTGGTCCAGTCCAATTTTTCAGATTCAAACTCAGAAGTATCAGCATCTGAGTCAGTTACAACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGgaatgaCGGATGAAGTTGGGCGCCAAAGAGGTGGAAGGGAAAGTAGAGCACACAGCTCTGCACGGAGAGAGGCTACCCTAGAACGTTCTAAGAGGAAAGTAGCCGGTACGTCATCCTTGAGGGCAGAAGTTGAAGAGGGTGGTACATCAACCGTGAGGGCTGAAGTTGAAGAGGCTGAAGCTCAACATCCTGAACCCGTGGCTGAAGAGGATGTTGAAGCTCAAAGGGATGTGGAAGTTGATGAGCAGGAAGAGGAACAATCTGATGAGCAGGAAAAGGAACAAAGAAGTGATGCAGAAGAGGACCAAGTTAATGAGGctgaaccaccaccaccaccagcacCTAAACAAACCAAAAGGAATCGGAGAACAACAACTGCAAGAAACCCGCCAAAAGTAGCAAAACCACAAGTTACAGAATTTGGTGGCGGACCAAGTGATTTGTCGTTGCTGCCGTCTTTTGGTGGTCATGTAGCCGCTGCGTTGTGGAGAGGAGaagtaaTGTCGCGAAAGGNNNNNNNNNNCGAAAGGACACTCAAGTGCATGAATCCTGGGAAGAGAATCAATTCGCTTGATAAACCAGAGAATGATAAAGCATGGTTTTGGGATAGAGTGGAAGCTAGTGGACTGCGACCGTTGTTGAAGACGAATTACAATCATGTGGGCTCCGGACTATTGACGGCATTTACTGAGCGTTGGCAACCAGAGACCGGTACATTCCATCTCCCTATTGGTGAGATGACCATCACCTTGGATGATGTATCGTGTTTGCTCCACATTCCGATAACGGGGAAGATGCTGAACCATGCTGGAACATCATGCACCATGGAGGAAGGGCAAGATATGTGCGAGGAGTTGCTAAACTTTAGCAGGGAAGATGCTCAGAAAgagtttgataaaatgaaaGGGGCGCATGTATCATTTGCAAAGCTTTTGGAAATATATCATGACAACTTGAATTTGGCGTTGGCAGCAGAGAACAATGAAGATGAGGAGGAGGAGACAGTTGAATTTCTAAGGGATTGCACAGTTAGAGCTTTTTTGCTATACCTGATCGGAGGAACCCTATTTACCAACAAAAGTGCTCAATATGTGGATTTGATATTTCTTTCTTACTTGCAAGACATCCCATTAATTAACACTTGGAATTGGGGTGCTTCTGGACTTGCATACATGTATAACTATTTGGATCGTGCGAGCCAGCGTAGATGCGGGAACCATGGTGAATACAACTGTATGTTTCAGAGGTACGGACAACGATTTCTTGATGAGAACTACACCAATGAAGAACCAGTTGGAGCCAAATATTATCCGTTGAAGACAGGCAAATGGCCATATGAGACGAGGACTTCATTGGATCGGATGGAGGTTGATGAAGTCACATTTTGCCCTTATGAGGATCATCACCAGTTCTGTCCCTTTCAAGATATCAGTTGGTACTCTGGTTGGATAATGTGTGGAAGCTCCATGATATGTCCACATTTGCCTGAGCGTGTCCTCAGATAA 2544 0.4057 MMTSQNFNNGDINMTLFPLSPIPPSSSHSMTNPEMGLQILSPSLFQSKEIRETKEEDVYFGVHSKNLSLKLGDEEGEEKSSVSVKIGYSKLCSRGHWRPAEDAKLKELVAEFGPQNWNLIAEHLDGRSGKSCRLRWFNQLDPRINKRTFSEEEEERLLAAHKMYGNKWAMIARLFPGRTDNAVKNHWHVIMARRHREQCSVYRRRKPVVESFSKGLKLSLSNNAASDSTISSTIDGNASACTNLSLTPSSANLSTQLFDKLVAPIQNHQDFGSLIMGKSRENVIATRDVSFDKYFGASKKQEQVEKLKVIDVVQSNFSDSNSEVSASESVTTNRSNISISGESENVGMTDEVGRQRGGRESRAHSSARREATLERSKRKVAGTSSLRAEVEEGGTSTVRAEVEEAEAQHPEPVAEEDVEAQRDVEVDEQEEEQSDEQEKEQRSDAEEDQVNEAEPPPPPAPKQTKRNRRTTTARNPPKVAKPQVTEFGGGPSDLSLLPSFGGHVAAALWRGEVMSRKXXXXERTLKCMNPGKRINSLDKPENDKAWFWDRVEASGLRPLLKTNYNHVGSGLLTAFTERWQPETGTFHLPIGEMTITLDDVSCLLHIPITGKMLNHAGTSCTMEEGQDMCEELLNFSREDAQKEFDKMKGAHVSFAKLLEIYHDNLNLALAAENNEDEEEETVEFLRDCTVRAFLLYLIGGTLFTNKSAQYVDLIFLSYLQDIPLINTWNWGASGLAYMYNYLDRASQRRCGNHGEYNCMFQRYGQRFLDENYTNEEPVGAKYYPLKTGKWPYETRTSLDRMEVDEVTFCPYEDHHQFCPFQDISWYSGWIMCGSSMICPHLPERVLR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03082 847 MobiDBLite consensus disorder prediction 420 435 - -
Tsu07g03082 847 ProSiteProfiles Myb-like domain profile. 94 140 IPR001005 -
Tsu07g03082 847 CDD SANT 97 138 IPR001005 -
Tsu07g03082 847 Gene3D - 94 145 - -
Tsu07g03082 847 MobiDBLite consensus disorder prediction 324 499 - -
Tsu07g03082 847 Gene3D - 147 206 - -
Tsu07g03082 847 SUPERFAMILY Homeodomain-like 94 187 IPR009057 -
Tsu07g03082 847 Pfam Plant mobile domain 569 817 IPR019557 -
Tsu07g03082 847 PANTHER MYB PROTEIN-RELATED 68 347 - -
Tsu07g03082 847 MobiDBLite consensus disorder prediction 353 385 - -
Tsu07g03082 847 ProSiteProfiles Myb-like domain profile. 141 191 IPR001005 -
Tsu07g03082 847 CDD SANT 157 188 IPR001005 -
Tsu07g03082 847 Pfam Myb-like DNA-binding domain 147 189 IPR001005 -
Tsu07g03082 847 Pfam Myb-like DNA-binding domain 94 140 IPR001005 -
Tsu07g03082 847 SMART sant 93 142 IPR001005 -
Tsu07g03082 847 SMART sant 145 193 IPR001005 -
Tsu07g03082 847 MobiDBLite consensus disorder prediction 324 345 - -
Tsu07g03082 847 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 195 IPR017930 -
Tsu07g03082 847 PANTHER OS08G0435700 PROTEIN 68 347 - -
Tsu07g03082 847 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 140 IPR017930 -
Tsu07g03082 847 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03082 Tsu-Chr7 36713186 36721456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03082 72 259 MYB Transcription Factor Family AT5G17800 57.071 4.68e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tsu07g03082 PMD 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03082 K09422 - gmx:100791795 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03082 07 36713186 36721456 Tsu07g03082 07 36713186 36721456 ECH