Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03081 ATGGAAGATAAGATGCAACATGACCCCCCTAACAACACTCCAACCCAACATGGTTCCGAGAAAACTGAACCGGTTAGGTCAAGATGGACACCAAAACCAGAACAAATTCTCATACTTGAGTCCATTTTCAATAGTGGTATGGTTAATCCACCAAAAGAAGAAACTATCAAAATAAGAAAACTTCTTGAAAAATTTGGCAACGTCGGCGACGCTAACGTCTTTTACTGGTTTCAAAACCGCCGGTCTAGATCTCGTCGCCGACAACGCCAGATGCAACAGGCAACACTTGATCAACAAAGAAATCAGATGGTTATGATGCAACAACCTCAACAAGTTGTTAATGATGGTGCAACTCCAACTGCAAGTGCAATGAATTCTTATCCAATAATGGGTGGTTTTGGtggttcttcttcttgtttgaATGATTCTTctggttcttcttcttcatcatgtgGTGGTGTTCTTAATGGTCAACAAGGCATGGATGGTTTCTTTTCAGTTTCTTCTCAAATGGGTTTTCTTGGAATTGATCAAACTTTGACTCCATCTTCACTTTTGTGCCCTCCTTTTCCTTCCAATTTGAACTATCACCCTGgaTATGGAGGTGCTGCTAGTAATGCTACAGGATTGATAACAGTGTTTATCAATGGAATAGCAACAGAAGTTCAGGCAGGACCAATAGACAtcaaaacagtgtttggagatGATGTGATGTTAGTTGATTCTTCTGGTGTGCCAGTTCCCACAAATGAACATGGCATCTTGATTCAGTGTTTGCACCATGGTGAAAGCTACTTTCTGGTTGCCTTTGGTCAGAAACTCACAACTACAACCAAGACATTATATTGTAACCCGAGTTCGATGTCTGATGTGAACAACTTTTag 885 0.3774 MEDKMQHDPPNNTPTQHGSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQRNQMVMMQQPQQVVNDGATPTASAMNSYPIMGGFGGSSSCLNDSSGSSSSSCGGVLNGQQGMDGFFSVSSQMGFLGIDQTLTPSSLLCPPFPSNLNYHPGYGGAASNATGLITVFINGIATEVQAGPIDIKTVFGDDVMLVDSSGVPVPTNEHGILIQCLHHGESYFLVAFGQKLTTTTKTLYCNPSSMSDVNNF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03081 294 Gene3D - 24 94 - -
Tsu07g03081 294 MobiDBLite consensus disorder prediction 1 30 - -
Tsu07g03081 294 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Tsu07g03081 294 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Tsu07g03081 294 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 269 IPR044558 GO:0003700|GO:0048830
Tsu07g03081 294 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 269 - -
Tsu07g03081 294 SMART HOX_1 24 91 IPR001356 GO:0003677
Tsu07g03081 294 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03081 Tsu-Chr7 36693538 36698673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03081 12 268 Wox Gene Family AT3G03660 49.818 1.44e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tsu07g03081 Homeodomain 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03081 - - gmx:100791266 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03081 07 36693538 36698673 Tsu07g03081 07 36693538 36698673 ECH