Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03078 ATGAATACCACCATTTTATTGATCTTCATATTCTTGTCTGCTCTTCCCTTTGCATTCGGTGATCTTAGGGTTGGATTCTATAGCTCTAGCTGTCCAAGAGCAGAGGTGATTGTACATCAAATTGTTGAGAGAAGTTTTAACCAAGACAGATCCATAACCGCTGCCTTGCTCCGTATGCACTTCCATGATTGCTTTGTCAGAgGTTGTGATGCATCCATATTAATAGAATCACAAAAGGGAAACCAATCAGAGAAAGCTGCACCAGCAAACAGGACTGTAAGAGGATACAACCTCATAGATGAAATAAAAAGAATCCTAGAAAATATATGTCCATTAACAGTTTCATGTGCAGACATTATAGCATTAGCAACAAGAGATTCAGTTGTTTTAGCAGGTGGACCAAGTTACAATGTCCCTACAGGAAGACGTGATGGATTGGTTTCAACTGTTCATGAAGTTCATCTTCCAGGACCAGAATCCTCGGTTCTGGAAGTATTACAAGTTTTTAAATTGAACGATTCACAAAAGGGTAATCAATCAGATAAAGAATTTGGAGCAAATGGAACAGTTAGAGGATTCAACCTCATCGATGAAATTAGAAGAGTCCTGGAAAATGCATGTCCAATAACAGTTTCTTATGCATACATAATTGCATTAGCAACAAGAGACTTTGTTACTTTAGCTGGTGGACCAAGCTACAATTTGCCTACAGGAAGATGCGGCGAATCAGTTTCAAGCGTTAATGAAGTATAA 753 0.3838 MNTTILLIFIFLSALPFAFGDLRVGFYSSSCPRAEVIVHQIVERSFNQDRSITAALLRMHFHDCFVRGCDASILIESQKGNQSEKAAPANRTVRGYNLIDEIKRILENICPLTVSCADIIALATRDSVVLAGGPSYNVPTGRRDGLVSTVHEVHLPGPESSVLEVLQVFKLNDSQKGNQSDKEFGANGTVRGFNLIDEIRRVLENACPITVSYAYIIALATRDFVTLAGGPSYNLPTGRCGESVSSVNEV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03078 250 Pfam Peroxidase 39 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 Pfam Peroxidase 179 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 Gene3D Peroxidase, domain 2 156 169 - -
Tsu07g03078 250 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PANTHER PEROXIDASE 178 248 - -
Tsu07g03078 250 PANTHER PEROXIDASE 17 170 - -
Tsu07g03078 250 Gene3D - 25 155 - -
Tsu07g03078 250 Gene3D - 170 250 - -
Tsu07g03078 250 SUPERFAMILY Heme-dependent peroxidases 172 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PANTHER PEROXIDASE 25-RELATED 178 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PANTHER PEROXIDASE 25-RELATED 17 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 ProSiteProfiles Plant heme peroxidase family profile. 171 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 ProSiteProfiles Plant heme peroxidase family profile. 21 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03078 250 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Tsu07g03078 250 SUPERFAMILY Heme-dependent peroxidases 21 170 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03078 Tsu-Chr7 36663196 36667099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03078 171 250 Peroxidase AT4G26010 52.500 3.36e-18 80.9