Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03077 ATGGCAGACCCTACATCATCCATCTACAATTTCCTTTCAAGAGAAGGTTCAAAAAGACATTACCCCCAGTTACTACCACCACCTAATTCACCACGCAGTTTTCAATGTCATTTCTGCCACCGTAAGTTCTACTCTTCTCAAGCACTTGGCGGCCACCAAAACGCTCATAAACTCGAGAGAGCCGCTGCAAGGAGATTAACCAAGCCCTTCACCCATTTTGACAATAATATTAATGGGCCTTTTCACTCTTCTTCTCCCACAATCAATGATCTCAGGCCCATGCCCAAGCCTGAGTTAGAAACTTCTTCCTTTTTCCACAATTACCCCTACTTGCATGAAGTTGAGCCTTTTCATCACAATGCTCCTCCTTCTCCTCAACCTTCTAACCATGTCAATCTTGACCTCACTCTTCGCTTGTGA 420 0.4452 MADPTSSIYNFLSREGSKRHYPQLLPPPNSPRSFQCHFCHRKFYSSQALGGHQNAHKLERAAARRLTKPFTHFDNNINGPFHSSSPTINDLRPMPKPELETSSFFHNYPYLHEVEPFHHNAPPSPQPSNHVNLDLTLRL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03077 139 PANTHER ZINC FINGER PROTEIN KNUCKLES 18 108 - -
Tsu07g03077 139 Gene3D Classic Zinc Finger 26 77 - -
Tsu07g03077 139 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Tsu07g03077 139 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Tsu07g03077 139 MobiDBLite consensus disorder prediction 124 139 - -
Tsu07g03077 139 MobiDBLite consensus disorder prediction 71 96 - -
Tsu07g03077 139 MobiDBLite consensus disorder prediction 71 90 - -
Tsu07g03077 139 PANTHER ZINC FINGER PROTEIN JAGGED 18 108 IPR045320 GO:0003700
Tsu07g03077 139 MobiDBLite consensus disorder prediction 120 139 - -
Tsu07g03077 139 SUPERFAMILY beta-beta-alpha zinc fingers 31 61 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03077 Tsu-Chr7 36634432 36634851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03077 31 70 C2H2 Transcription Factor Family AT5G57520 67.500 5.22e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03077 - - mtr:MTR_7g086860 196.438