Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03071 ATGCTCCCTCTCAAGCGGAAACTCATACCGTCGTTGACACTTTTTCAACGGGCCCCTTCACTTGAACCAGGTTCTGATACCACTGTTAGAACACGAGGGGGTTGTGATGTCTTTCTAATAGACCCTACAAACAAAACCGTTTCAGAGAAAAAAGATGGCGCGAACGCAAGTGTTAGAGGTTTTGATCTAATCGATGAAGTAAAGGAAGCACTTGAAGTTGTTTGTCCTTTCACAGTATCATGTGCAGATATCATATCACTTACTACAAGAGATGATGTGGCTTTATCAGGAGGACCGAAATACAGCGTTCCGACTGGAAGACGGGATGGACTAGTCTCCAACATAGCTGATGTTGAGTTACCAGGACCTGACATATCAATTCCAGCACTATCAAAGTTTTTTACTACAAAAGGAATTACAAATGAAGAAATGGTGGCCTTGTTGGGAGCACATACGGTCTGCGGATTTTTTGATGATAGGCTAACTGATTTTGATGGGAAACGTGATCCTACAATGGATCCAACAATGGGTGGGATGGGTAATTAA 546 0.4267 MLPLKRKLIPSLTLFQRAPSLEPGSDTTVRTRGGCDVFLIDPTNKTVSEKKDGANASVRGFDLIDEVKEALEVVCPFTVSCADIISLTTRDDVALSGGPKYSVPTGRRDGLVSNIADVELPGPDISIPALSKFFTTKGITNEEMVALLGAHTVCGFFDDRLTDFDGKRDPTMDPTMGGMGN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03071 181 ProSitePatterns Peroxidases proximal heme-ligand signature. 143 153 IPR019793 -
Tsu07g03071 181 Gene3D Peroxidase, domain 2 121 176 - -
Tsu07g03071 181 ProSiteProfiles Plant heme peroxidase family profile. 34 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 Pfam Peroxidase 29 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PANTHER PEROXIDASE 25-RELATED 33 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 SUPERFAMILY Heme-dependent peroxidases 33 175 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PANTHER PEROXIDASE 33 177 - -
Tsu07g03071 181 PRINTS Haem peroxidase superfamily signature 97 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PRINTS Haem peroxidase superfamily signature 79 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PRINTS Haem peroxidase superfamily signature 143 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PRINTS Plant peroxidase signature 97 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PRINTS Plant peroxidase signature 142 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PRINTS Plant peroxidase signature 59 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 PRINTS Plant peroxidase signature 78 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g03071 181 Gene3D - 34 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03071 Tsu-Chr7 36572188 36573903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03071 34 176 Peroxidase AT5G17820 59.333 2.22e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03071 K00430 - cit:102608531 179.489