Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03061 ATGCAAATGCAACTTCTCTTCTACCGACACGTTGTTAGTAATGATATTGATGAAGATTGTAAAAGCTTTCATAGCTTAAGTGATTATAAAGCTAAATGCTTTTACCTTAAATCAAACAACCCTTGTGTCTCACAAGGTTATGTTGATTATCTTTATCTTTTCTATTGCAAAATTGGGAATTTCCCTTTATTGGGTCATACCCTTTTGTTTCTATGGCTATTGGTTCTCTTTTATCTTCTAGCTAATACAGCTTCCGAATACTTTTGTCCTTCTCTTGATAATCTCTCAAAAGTTTTGAGACTTTCACCAACAATTGCTGGTGttactcttctctctcttgGTAATGGTGCTAGTGATGTTTTTGCtacatttgtttctttcaaAGGTAGTGGAACACAAGATATTGGTTTCAACACTGTTCTTGGTGGCGGTTCCTTTGTTTCATGTGTTGTTGTTGGAATTATAAGTATATCAATTAGACATAGAGGGATTCGTGTGAAAAAATCTGCTTTGATAAGAgatgtttgttttcttctctTTGTTCTTGTTTGCCTTTTCACTATCTTCCTCAGTGGTGAAATCAATGTTGTTGTAGCAATTGGTTTTTGTTTGATGTATGTGGTTTATGTTGGTGTTGTTTATTTCTCATCTGGAAAAAGAAAAGGTGTTTGTGATGAAGAAGCTGAAACTGAAAGTGATTATGGTGATTCAAGGAATGGTAATTGCAATGATTTAGGTGTTCCTTTACTTGGTTATATGGAGAAAGGAATGATTCATTATACTTCAAATGGTGCTGAAGAATGTGAGTTTATTAAAATTGAGAAGAATTGTTGCAATGAAAAATCATCATTTTGTAGAAGATTACTTTGTGTTATGAATATGCCACTTTACTTACCTAGAAGATTAACAATTCCTGTTGTTTGTGAAGAAAAATGGTCTAAAGTATATGCAGTTTCATCAGCTATGTTATCACCACTTTTATTAGCTTTCCTTTGGATTCCAAACAATGAAAACAGTCTCTCAAATTCATCAAGCTTAATAGTTTATGGAATTGGATTATTGATTGGAATTATATTAGGAGTAATAGCAATTTTCACAACTGAGTCATCAAATCCACCAAAAAAGTACTTATTACCATGGTTAGTTGCAGGATTTGTGATGAGTGTGACATGGAGTTACATTTCAGCTCAAGAATTAGTAGGATTGTTAGTTTCACTTGGTTTCATATGTGGTGTTAATCCATCAATACTTGGATTAACAGTACTTGCTTGGGGAAATTCAATTGGTGATTTAGTGACTAATTTGACAATGGCTTTAAATGGTGGACCAGAGGGGGTTCAAATAGCAATTTCAGGTTGTTATGCTGGTCCTATCTTCAATACTGTTATTGGTTTAGGGTTATCACTTGTTACTACAACTTGGTGTGAGTACCCTTCATCTATTGTGATTCCTAAAGATCCATATTTGTGGGAAACATTGGCATTTTTGGTTATTGGATTGATTTGGGCACttattgttttgattagaaGAGATATGAAGCTTGATGCAATGTTAGGTGGAGGACTTTTAgctatttactttatttctcttaTTCTTAGGCTTATTCAAACATTAGGGTCACTTCAATTTAAGGATATGTTGGTGTGA 1647 0.3212 MQMQLLFYRHVVSNDIDEDCKSFHSLSDYKAKCFYLKSNNPCVSQGYVDYLYLFYCKIGNFPLLGHTLLFLWLLVLFYLLANTASEYFCPSLDNLSKVLRLSPTIAGVTLLSLGNGASDVFATFVSFKGSGTQDIGFNTVLGGGSFVSCVVVGIISISIRHRGIRVKKSALIRDVCFLLFVLVCLFTIFLSGEINVVVAIGFCLMYVVYVGVVYFSSGKRKGVCDEEAETESDYGDSRNGNCNDLGVPLLGYMEKGMIHYTSNGAEECEFIKIEKNCCNEKSSFCRRLLCVMNMPLYLPRRLTIPVVCEEKWSKVYAVSSAMLSPLLLAFLWIPNNENSLSNSSSLIVYGIGLLIGIILGVIAIFTTESSNPPKKYLLPWLVAGFVMSVTWSYISAQELVGLLVSLGFICGVNPSILGLTVLAWGNSIGDLVTNLTMALNGGPEGVQIAISGCYAGPIFNTVIGLGLSLVTTTWCEYPSSIVIPKDPYLWETLAFLVIGLIWALIVLIRRDMKLDAMLGGGLLAIYFISLILRLIQTLGSLQFKDMLV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03061 548 Pfam Sodium/calcium exchanger protein 381 533 IPR004837 GO:0016021|GO:0055085
Tsu07g03061 548 Pfam Sodium/calcium exchanger protein 70 214 IPR004837 GO:0016021|GO:0055085
Tsu07g03061 548 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 13 542 - -
Tsu07g03061 548 PANTHER CATION CALCIUM EXCHANGER 13 542 - -
Tsu07g03061 548 Gene3D - 303 535 IPR044880 -
Tsu07g03061 548 Gene3D - 101 226 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03061 Tsu-Chr7 36484908 36487073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03061 17 542 Antiporters AT5G17850 53.686 8.58e-166 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03061 K13754 - gmx:100787016 726.857