Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03052 ATGGCTTCTGTGTTTCTTTTGTTGGTTACTTTGTTACTTTCTATAAACCATTCAGAGCAACTTCAATCTTCACACTCTCAAACCCTTCTAAGAATTCAACAGCTATTGAATTTTCCTTCTGCTTTAAGCAACTGGAATAATTTCACAGATTTTTGCAACACAGATTCAAACTCTTCACTCACTGTAGTATGCTATGAAGATACAATAACTCAACTTCATATAATAGGTGAAGGAAAAACTCAAGCATTACCTAAAAATTTCTCAATTGATTCATTTGTCACAACACTAGTAAAGCTACCAAGTTTGAAGGTTCTTACATTGGTTTCTCTTGGTATTTGGGGTCCATTACCTGGTAAAATTTCTCAGTTATCGTCGTTGGAAATAGTTAATATGAGTTCGAATCATCTACACGGTTCGATCCCTATGGAACTTTCGTCACTCGTAAATCTTCAGACACTCATTCTTGACAATAACATGTTTTCTGGTCAGCTTCCTATTTGGATTGATTTGCTTTCAGAGTTAACTGTGTTGagtttgaaaaacaatttgttCAATGGATCGTTACCGAATTCCGTTAGTAACTTGGAGAATTTGAGAATTCTTTCACTTTCTCATAATAAGTTATATGGATTAGTACCTGATTTGAGTCATTTGAGAAATCTTCAAATACTTGAATTGGATAGTAATGCTTTTGGACCTCAATTTCCTAAGCTTGGTAACAAGTTGGTTACTATTGTGCTAAGAGATAACAAATTCAGGTCTGGTATTCCTGTTGAAGTGAGCTCATATTATCAGCTCGAGCGATTCGATATCTCATCAAACACTTTTGTAGGGCCATTCCAACCAGCATTGTTGTCACTTCCTTCTATTGCTTACCTCAACATTTCTAGGAACAAATTAACCGGGATGCTTTTCGAGAACGTTTCTTGCAATTCTGAGATTGAAGTTGTTGATTTATCGTCGAATCTTTTAACTGGAAGCTTACCTAAATGTTTAGTTTCAAATTCTAGTGATAGGACTGTTTTGTATGCTAGAAATTGTCTCAAGATGACGAATCAAAATCAGCATCCTCCGCCTCTTTGTCACACTGAAGCCTTAGCAGTGGGAGTATTACCCgagacaaagaaaaaacaagtaTCAAAGGTAGTTCTTACCCTTGGTATAGTAGGTGGAACTCTTGGTGGAGTAGCACTTgcttttctgattttatttattgttagaAGAGGGAATGCTAGAAGCAAAATGAAGAATCCTCCAACAAGAATAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAGTTTGGAGCACTTGGCCTACCAAACTATAGGAGTTTTTCATTGGAAGAGATTGAGGCAGCTACAAACAACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGAGAGATGTACAGAGGTCAGCTGAAGAATGGTTCGTTTGTTGTTATTAGATGTATCAAAATGAATAAACGATACAGCACTCAAAACTTCATGCAGCACATGGAGCTTATATCAAAACTTAGGCATCGACATTTAGTCAGCGCTATTGGACACTGCTTCGAATGTTCTTTAGAAGATTCAAGTGTCAGCAAAATATTCCTTGTCTTTGAATACGTACCTAATGGCACACTCAGGAGCTGGACTTCTGATGGGCATAGCGGAAAATCTCTGAATTGGACCCAACGCATAGGAGTTGCAATTGGAGTAGCAAAGGGAATCCAGTTTCTGCATACAGGAATTGTCCCTAGTGTATATTCAAACAATATCAAAATAGAAGATATTTTATTAGATCGAAATTTTGTTGCAAAAATTAGCAGTTATAACCTGCCTCTGTTATCTAACATAGGAAagGTTCGGCGTGGAAATTCGTCTAATGAATCCAAACATTCTATTATCAATAAAAGTGGAAAGCATGAAGATAAGTGTGATATATATGACTTTGGAGTAATACTACTTGAAATCATTCTAGGAAGAACAATTAAGACAACAAATGATGCAGAAGCTTTTAAGGAACTGTTGCAAGCAAGCTTAGGAGCTGATGAGGATGCTAGGAGGAGCATTGTTGATCCAGCGATTCGCAAGATATGTTTGAGTCAATCATTGAAGACAATGATGGAGATATGTGTGAAGTGTCTGTTTAAAGATCCAGCAGAAAGACCCTCCACAGAGGATGTTCTGTGGAATTTGCAATTTGCTGCACAAGTACAGGATGCTTGGAGAGGGGATTCTCAAAGTAGTGAAGGGTCACCAGGTTCTCCTTTAGAGGCGCGAAGACAGGCCTTCCATTAG 2334 0.3663 MASVFLLLVTLLLSINHSEQLQSSHSQTLLRIQQLLNFPSALSNWNNFTDFCNTDSNSSLTVVCYEDTITQLHIIGEGKTQALPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKISQLSSLEIVNMSSNHLHGSIPMELSSLVNLQTLILDNNMFSGQLPIWIDLLSELTVLSLKNNLFNGSLPNSVSNLENLRILSLSHNKLYGLVPDLSHLRNLQILELDSNAFGPQFPKLGNKLVTIVLRDNKFRSGIPVEVSSYYQLERFDISSNTFVGPFQPALLSLPSIAYLNISRNKLTGMLFENVSCNSEIEVVDLSSNLLTGSLPKCLVSNSSDRTVLYARNCLKMTNQNQHPPPLCHTEALAVGVLPETKKKQVSKVVLTLGIVGGTLGGVALAFLILFIVRRGNARSKMKNPPTRIISENAASGYTSKLLSDARYISQTKKFGALGLPNYRSFSLEEIEAATNNFDTASLMGEDSYGEMYRGQLKNGSFVVIRCIKMNKRYSTQNFMQHMELISKLRHRHLVSAIGHCFECSLEDSSVSKIFLVFEYVPNGTLRSWTSDGHSGKSLNWTQRIGVAIGVAKGIQFLHTGIVPSVYSNNIKIEDILLDRNFVAKISSYNLPLLSNIGKVRRGNSSNESKHSIINKSGKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKELLQASLGADEDARRSIVDPAIRKICLSQSLKTMMEICVKCLFKDPAERPSTEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLEARRQAFH 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03052 777 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Tsu07g03052 777 SUPERFAMILY Protein kinase-like (PK-like) 453 746 IPR011009 -
Tsu07g03052 777 SUPERFAMILY L domain-like 30 348 - -
Tsu07g03052 777 Gene3D Ribonuclease Inhibitor 239 356 IPR032675 -
Tsu07g03052 777 Gene3D Transferase(Phosphotransferase) domain 1 555 754 - -
Tsu07g03052 777 Pfam Protein tyrosine and serine/threonine kinase 475 741 IPR001245 GO:0004672|GO:0006468
Tsu07g03052 777 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 765 - -
Tsu07g03052 777 Gene3D Phosphorylase Kinase; domain 1 442 553 - -
Tsu07g03052 777 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 765 - -
Tsu07g03052 777 Gene3D Ribonuclease Inhibitor 22 238 IPR032675 -
Tsu07g03052 777 MobiDBLite consensus disorder prediction 755 777 - -
Tsu07g03052 777 ProSiteProfiles Protein kinase domain profile. 471 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03052 Tsu-Chr7 36370052 36373577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03052 38 765 Miscellaneous Gene Families AT3G03770 62.483 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tsu07g03052 PK_Tyr_Ser-Thr 1.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03052 - - gmx:100807539 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03052 07 36370052 36373577 Tsu07g03052 07 36370052 36373577 ECH