Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03018 atggttAACATCCACCATTCATACACAGTGAAACCTTCCAAgacaacaccaacaacaacactCTCTCTTTCCCTCTGTGATCAACTCAAGCTCCCTAATCATGGATACCAACTTTATCTCtacacaaacaacaaaaacaattcaCCATCACTTATCTCTTCAACAAACATTCTCATAACCTCTCTCTCCAAAACACTCACTCACTACTATCCCTTTGCAGGTAGATTAACTTGGATCAAACCAAAAAACCATTTACAACTTAATTGCAACAACAAAGGTGCATACTTTTTAGAAGCAACATGTGATGTCACTTTAAAAGATTTATTAGGTAATAGTTTTGATTCTACCCATGATGTTCTAAAACTACTCCCAAAAATTAACTATGATGTTCCTATTGAACATGTTCCTTTGTTGGTTATTCAATTCACCAAATTCTCTTGTGGATCTTTCTCTCTTGCTCTTTGTATGTCTCGTTGTGTTCTTGATGGCTCCTCTGCTTCTAATTTCATCAACTCATGGGCTAAACTAGCTAAAGGTGAGAATTTAGATTCTTATTTGATTCCTTTTCTTGATAGAACTTTGTTAGATTCAAAAACCCTTAATTTACCACCACGTTTTCAACACCATGAATTTTCGCCACCACCCATTTGGGAAGGTTGTAGTAATAACTCAACCCATTTGAGAAAAAATCCATCTTTTGCCACTACCATGTTGAAATTCACCAAAAAACAAGTTGAAAAACTCAAGAACAAAGCTAACAACAATGAAAACAAGGTACGAGGTTATACTAGTTTTGAGGTTATTACTGGTTACTTATGGAGATGTGTTAGTAAAGTGCGTTTTGAAGGGAATTGGAATCAACCAACAAGGTTAACAACTTTGGTTAATTGTAGAAAAAAGTTGAATCCTCCAATTCCTAAGAATTATTTGGGAAATGCAACTTTTCCAACAGTGACAGAAATTTGTTCATTTGATGATGTTGTGAATAAGTCCTTTTGTTATGTGGTTGGGAAAGTGAGAGAAGctattgagaaaatgaatgaTGAGTATGTAAGATCTGGTCTTGATTATATAGCAAATCAGAAAGATATGAATTTGTTAAGGGACAAGTTATATAATTTTGCTAAAAGAAATGGACAATTTGGCGATAACCCGAATTTGTATGTTGTTGGTTGGACTAATTTTCCATTTTATGAGACTGATTTTGGATGGGGAAAACCTGATTATTTGGTTCCTGGGATTGATAATTCTAATGGTATTGGTAAGGTTTTTATTGTTGATGAAGCTAATGGTGATGGTTTTCTTGTTACTGTTTGTTTGCAACCTCTTCATATAGATGCTTTGAAGAAATTGTTTTATGAGGATATGGAGATTATCACTAGTTCCAAACTGTGA 1395 0.3269 MVNIHHSYTVKPSKTTPTTTLSLSLCDQLKLPNHGYQLYLYTNNKNNSPSLISSTNILITSLSKTLTHYYPFAGRLTWIKPKNHLQLNCNNKGAYFLEATCDVTLKDLLGNSFDSTHDVLKLLPKINYDVPIEHVPLLVIQFTKFSCGSFSLALCMSRCVLDGSSASNFINSWAKLAKGENLDSYLIPFLDRTLLDSKTLNLPPRFQHHEFSPPPIWEGCSNNSTHLRKNPSFATTMLKFTKKQVEKLKNKANNNENKVRGYTSFEVITGYLWRCVSKVRFEGNWNQPTRLTTLVNCRKKLNPPIPKNYLGNATFPTVTEICSFDDVVNKSFCYVVGKVREAIEKMNDEYVRSGLDYIANQKDMNLLRDKLYNFAKRNGQFGDNPNLYVVGWTNFPFYETDFGWGKPDYLVPGIDNSNGIGKVFIVDEANGDGFLVTVCLQPLHIDALKKLFYEDMEIITSSKL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03018 464 Coils Coil 238 258 - -
Tsu07g03018 464 Gene3D - 1 213 IPR023213 -
Tsu07g03018 464 Pfam Transferase family 1 453 - -
Tsu07g03018 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 48 460 - -
Tsu07g03018 464 Gene3D - 222 455 IPR023213 -
Tsu07g03018 464 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 48 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03018 Tsu-Chr7 35905854 35907812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03018 2 454 Monolignol Biosynthesis Gene Families AT5G48930 32.237 5.15e-73 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03018 K13065 - gmx:100819383 487.648