Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03017 ATGGTGAGTATTGAATCTCATTCCACTATCATCCCCTCTAAACCAACCCCTAATCCAAAACTCTACTCATTATGTGAACAAATTAAGCTTCGTACTCATGGTCCCGTACTCAATGTCTACAACGCACCTAACAACAATAACACATCAACCTTTCTTGAAACACTTAAAAACTCTCTTAGTCAAGCTTTGGTTATTTACTATCCACTAGCTGGAAGGTTGAGTTTAACCAAAGGAGGAAGATGGGAACTTCATTGCAATGCCAAAGGAGCACTTTTTTTAGAAGCCAAATGTGAAACTAACTTGAACGATTTTGGTGATTTTGTGCCAAATAATAATTTGGTGTCACAACTCATaccaaaaattaattacaatcTTCCCATTGAAGAAATTCCCTTATTGGCAGTGCAACTAACGAGGTTCCGTTGTGGTGGTTTTACGTTAGGTGTTTCCGCATGTCGGGCTGTAATTGACGGAACGGCAAATTCATGTTTCATGAATTTGTGGGCTAAGCTGACACGTGGGGAGAATTTGAGTGAAAATGAATTGGCACCATGTCACAATCGAACCATGTTGAATTCGCGCAAAGTCGCGCATTCACAATCCTTGCATTGGCATTGTGAGTTTCGCCCGGCTCCTCAATGGGTGGGTCGTGAATTAGGAAACTCTAGAGAAGTGAGTGTTGCTATTGTGAAACTCACGcaagaacaacttttaaaattgaaaaaaaatgctAATTCTCGTGTGAGTTTCCAACCCACCGTCTCCAAAGATGTCATAATTAGGAGAAAACCTTATTCAACTTTTGAGGTTATTGCAGGACATATTTGGAGGTGTGTCACTAAAGCACGTTACATAGGAAATAATGATCAACAGACGAGGTTGTCCACGTTGGTTGACATTAGAAATCGCTTAAACCCGCCACTTCCTAGTGGCTATGCTGGGAATGCAACATTTCCAACCGTGACACCAACTCGCTCTTTCAATGATCTTATTTGCAAACCTTTGGATAATGCAGTTGACGATGTTAGGAAAGCCGTTGAAAGGATCAAGGGGGAGTTTGTAATGTCGGCACTTGATTACATAGATAGGGAGGTGGACATGGATTTGTTGAGGTATAATATTTTTGGAAACCCTGCAAAGAGTGTGCGTGACGGAGAATCTAAGAGGAACCCAAATCTTTTTGTTGTTAGTTGGATGAATTTTTCACTTAAGAGTGCCGATTTTGGGTGCGGGGGACCTGTTTATTTTGGGCCAGGGTACATGGATTCTGAAGGGAAGGCCTTTATTATGAATAATGGTTATGGCGATGGTATTGTGGTGGCGATTTCGTTGGAGGCATCTTGTATGAATAGTTTTAGGAAGAAATTTTATGATGATATTGAAGAAGTGTTTTCTACTTCCAAATTGTGA 1410 0.3965 MVSIESHSTIIPSKPTPNPKLYSLCEQIKLRTHGPVLNVYNAPNNNNTSTFLETLKNSLSQALVIYYPLAGRLSLTKGGRWELHCNAKGALFLEAKCETNLNDFGDFVPNNNLVSQLIPKINYNLPIEEIPLLAVQLTRFRCGGFTLGVSACRAVIDGTANSCFMNLWAKLTRGENLSENELAPCHNRTMLNSRKVAHSQSLHWHCEFRPAPQWVGRELGNSREVSVAIVKLTQEQLLKLKKNANSRVSFQPTVSKDVIIRRKPYSTFEVIAGHIWRCVTKARYIGNNDQQTRLSTLVDIRNRLNPPLPSGYAGNATFPTVTPTRSFNDLICKPLDNAVDDVRKAVERIKGEFVMSALDYIDREVDMDLLRYNIFGNPAKSVRDGESKRNPNLFVVSWMNFSLKSADFGCGGPVYFGPGYMDSEGKAFIMNNGYGDGIVVAISLEASCMNSFRKKFYDDIEEVFSTSKL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03017 469 Pfam Transferase family 1 458 - -
Tsu07g03017 469 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 4 465 - -
Tsu07g03017 469 Gene3D - 216 457 IPR023213 -
Tsu07g03017 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 465 - -
Tsu07g03017 469 Gene3D - 1 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03017 Tsu-Chr7 35874158 35875567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03017 2 458 Monolignol Biosynthesis Gene Families AT5G48930 34.848 1.90e-83 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03017 K13065 - gmx:100775549 537.339