Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03016 ATGGAAGATGGGAAATTAAACATGGTAAGTGTCCTATCTCATTCAACTATCATCCCCTCTAAACAAACCCCTAATCCAAAACTCTTCTCATTATGTGAACAAATCAAGCTTCGTACTCATGCTCCTCTCCTTTATGTCTACAAACCACataatcaaaacaacacatcAACCTTCCTTGAAACACTTAAAAATTCTCTTAGCCAAGCTTTGGTTATTTACTATCCACTAGCTGGAAGATTGAGTTGGATCAAAGATGGAAGATGGGAAATTCATTGCAATTCCAAAGGAGCACTTTTTATAGAAGCCAAATGTGAAGAATTAACCGATTTGAATCAATTGGGTGATTTTGTACCAACTAATTTGGTGTCACAACTCATACCAAACAATAATTACAATCTTCCTCTTGAAGATATTCCCTTATTGGCTGTGCAACTAACGAGGTTTCGATGTGGCGGTTTTACATTAGGCATTGCTTTATGTCGAGCCGCCACTGATGGAACTGCAACCATGTGTTTCATGAATGCTTGGGCTAGGCTTGCGCGTGGGGAGAATTTGCACCAAAATGAATTTCCGTGTCATGATCGTACCATGTTAAATTCCCGTAAACTAACACATTTGCCGTCCTTGCGTTGGCAGCACCGTGAGTTTGACGCGCCTCCTGTTTGGATGAGTAGTGATTTGAATGGTAATAGAGAAGTGAGTGTTGCTATTTTGAAACTCACTCGAGAACATGTTTCGAAGCTAAAGAAAAAAGCTAGTTCTCGCATGAGTATCCTACCCACCTCTAAAGATGTCCATATGACAAAACCTTATTCAACTTTTGAGGTTATTGCAGGACATCTTTGGAAGTGTGTTACTAAAGCACGCTACATAGGAAATCGTGATCAATCAACGAGGTTGTCCACACTAGTTAATTGTAGAAATCGTTTACAACCACCGCTTCCTAATGGTTATGTTGGGAATGCAGCATTTCCAACCGTGACACCAACTCGTTCCTTTAATGATCTTATTTATAAACCTTTGGGCGATGCAGTTGAGGATGTTAAGAAAGCAATTGAAAGGGTGACCGGGGGATATGTAAGGTCCGCACTTAATTACATAGATAGCGAAAATAACATGGATTTGTTGAGGTATAATTTTCACTATCCTGCAAAGAGTGTAATTGAGGGACAATATAAGGGAAACCCAAATCTTTTTGTTGTAAGTTGGATGAATTTTTCGTATAAGGATGCAAATTTTGGATTGGGAGAACCTATATATTTTGGACCAGGATTTATGGATTCTGAAGGAAAGGCTTTcattatgaataataataacgGTGATGGTATTGTGGTGGCTATTTCTTTAGAAGCATCTTGTATGGATAgttttaagaaatatttttatgatgATATTAGGGAGATGTTTTGTAATTCTAAATTGTAG 1425 0.3712 MEDGKLNMVSVLSHSTIIPSKQTPNPKLFSLCEQIKLRTHAPLLYVYKPHNQNNTSTFLETLKNSLSQALVIYYPLAGRLSWIKDGRWEIHCNSKGALFIEAKCEELTDLNQLGDFVPTNLVSQLIPNNNYNLPLEDIPLLAVQLTRFRCGGFTLGIALCRAATDGTATMCFMNAWARLARGENLHQNEFPCHDRTMLNSRKLTHLPSLRWQHREFDAPPVWMSSDLNGNREVSVAILKLTREHVSKLKKKASSRMSILPTSKDVHMTKPYSTFEVIAGHLWKCVTKARYIGNRDQSTRLSTLVNCRNRLQPPLPNGYVGNAAFPTVTPTRSFNDLIYKPLGDAVEDVKKAIERVTGGYVRSALNYIDSENNMDLLRYNFHYPAKSVIEGQYKGNPNLFVVSWMNFSYKDANFGLGEPIYFGPGFMDSEGKAFIMNNNNGDGIVVAISLEASCMDSFKKYFYDDIREMFCNSKL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03016 474 Pfam Transferase family 8 463 - -
Tsu07g03016 474 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 12 470 - -
Tsu07g03016 474 Gene3D - 224 464 IPR023213 -
Tsu07g03016 474 Gene3D - 6 218 IPR023213 -
Tsu07g03016 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03016 Tsu-Chr7 35868719 35870143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03016 9 463 Monolignol Biosynthesis Gene Families AT5G48930 35.281 2.76e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03016 K13065 - gmx:100775549 596.275