Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03013 ATGAGTTCCTCAAACATTACATATTCCATTATCACAAACCGTGACAATACAACGCAGGTGTGTTACAATAAGACAACATCACATGGCTCTTCGCTTTGGGTTCAAAATTCTTTAGAAGAAACTCTACCTGCATTTGTTCTTCAATTAGCTCTTATCTTATCACTCAATCGTATTTTCCTCTTTCTCTCTGAATTTTGCAATGTACCTCGTATTGTTCCCAACATTTTTACTGGTTTTTTATTAGGTCCATCTGTTTTGGGAAAATGGAAATATTTCTACAAAACTGTATTCCCATACAACAGTTTGTTACCATTAGAGACAATGGGAGCATTGACACTTGTTTACTATGTGTTCTTGGTTGGCTTAGAAGTGGATttgaaatcaattaaaaaatgttacttCAATAAGAAGGCAATGGTTGTTACATTTACTGGTATAGTCTTCACATTACCAACTGGTATGTGGTTATACTACTTTCTTGTAACTGACATGGGTCACAAAAATATGTCACCTATAGGAGCTGATAAACACATGAAAGGTGCATTAATTTGGGGAATGACTCTTTCATGTAGTAGTGAGTTTCCTGAAATTGTTAAAATCCTTTCAGATTTGAAGCTTTTGTTAACAGATAATGGACAATTGGCAATAActtctattttgattaatgaCTTGTTCTCGTGGACATTATTTATGTTGGTTCTAACACAACTcatttatgtttcttttgagTCGCTACTCATCATCGTCGTAGTTGTGTTGGTATCTGTTTATGTGATTCATCCTTTTGCTAAGTGGCTTGTTAAGAAATTTTCAAATGCTGATCGCGAGCTTAGGGAGACGCAAGTGGTGTTTCTTCTTAACGTGGTTTTGGTCTTTGGATTAATCTTTGATGGGTTAGGTTCACATTCAATAACCGGTGCTTTCTTTTTAGGAGTTATTATCCCAAAGGGTGCGCTTAACACTGCGGTTCAAGATAAGGTTTATGATTTTGTGTCTGCATTCATGATGCCTCTATTTTTTCTCATGGTTGGGGAGAGAACTAATATTCAAGATTTGGCTTTGAACACAAGTTGGTTAACCATTGTAGTTGTTATTGTGTTGGCTTTCTTGGTAAAAATGGTGTTCGTATTTGCGATTTCTAGGATATATCGGATGCCACTCATGGAAGGATTATGCCTTGCACTTCTCATGAATACTAAAGGGACAGTGCCGTTAATCATTCTATACTCCGCCATGGATAGACTAGAACTAGAGAGCCAAACCTTTGTGGTGATTTTGTTGGCATGTTGGTTAATGACAGCTATTGCTGGTCCTGTCTTATCTATCATCACAAAAACCGCCGCAAGCAAACATATTGGAAGTAAAAGGAAGCATATCCAAGAAACGCGACCAGACTCGCCACTTAGAGTGTTGGCTTGTGTCCACTCAAAACATGACGCCAATGCCATCATCGACCTTCTCAAAGCATCCAGTCCATCAGTTAGGTCTCCAATTCAGGTGTTGGCAGTGGAGTTGATCGAGATGACAAATAGACCAGCTTCATCAGTGGTCATAAGAGACGCTCGGAAGCCAGCATTTAAATCCCATTCAATGAGGGTGGATAGCTTACAGAAAAACAATGGAGACAAACTTGGAAGCTTCGACAATCTCAGCCAAGCTATATTTGCTGACAAACTCAGAATTATCTCCCACTACAACACCATGCATAAAGACATCATAAACCTCTGCACACGCAGAAACGTAAACCTCATTGTAACCACTCTCCACAGACAACCTACCTATGACGGATTAGGCACAGGAATAGCGACTGCTAGAGCTGTCAACATAATCAACAGAGACCATGCAAGCAAGGATGAGAAGAGACTAGTGGTGGAGCATCTAGAAAAAGAAGCACCGTGCTGTTTAGCAATTTTCGTTGACCGTGAATTCGATGGTGAGAAGAATTCTAAAGGGATGAGAATTGCTATGTTCTACATTGGTGGTGTTGATGACCGTGAAGCACTTTCTTATGCTTGGAGAATGAGTAGGAACATGGCGGTTCAGTTAACAGTGGTGAGGCTTGTTTGGGACAGTCCTGATGATGAGTTCGATGAATTTGACAGAGAGTATTTAAGAGCGTTTGTGTATCAAACAAACGATACACCAACGGTTAGGTATTTGGAAAAAGTGGTGAAAGATGAGAAGGAAACTGTACAGCTTTTAAATAGGATAGGGAGTAAAGGATTCGATTTGTATATCATCGGGAGAGGACACGGGAGGAAGATGTCATTGGCGCAAACGTTGGATCCTGTTTTGGATGAGCCTGTTTTCGGTCCTCTTGGTGATACTTTGACAGATTTGAATTCTGCTTCTAAGACATCtattttgatatttcaaaaagaaGCTGAAAGTAATGATTCGGAGAAACACGAGCACAATGCTTCTGCGACAACTTCACAGTTTTCTGACGGTGTTATGGATCAACAGCAGATGTATAGTCCAGCAGTGTCATTTGGTCCCAATTATCGCTGA 2511 0.3887 MSSSNITYSIITNRDNTTQVCYNKTTSHGSSLWVQNSLEETLPAFVLQLALILSLNRIFLFLSEFCNVPRIVPNIFTGFLLGPSVLGKWKYFYKTVFPYNSLLPLETMGALTLVYYVFLVGLEVDLKSIKKCYFNKKAMVVTFTGIVFTLPTGMWLYYFLVTDMGHKNMSPIGADKHMKGALIWGMTLSCSSEFPEIVKILSDLKLLLTDNGQLAITSILINDLFSWTLFMLVLTQLIYVSFESLLIIVVVVLVSVYVIHPFAKWLVKKFSNADRELRETQVVFLLNVVLVFGLIFDGLGSHSITGAFFLGVIIPKGALNTAVQDKVYDFVSAFMMPLFFLMVGERTNIQDLALNTSWLTIVVVIVLAFLVKMVFVFAISRIYRMPLMEGLCLALLMNTKGTVPLIILYSAMDRLELESQTFVVILLACWLMTAIAGPVLSIITKTAASKHIGSKRKHIQETRPDSPLRVLACVHSKHDANAIIDLLKASSPSVRSPIQVLAVELIEMTNRPASSVVIRDARKPAFKSHSMRVDSLQKNNGDKLGSFDNLSQAIFADKLRIISHYNTMHKDIINLCTRRNVNLIVTTLHRQPTYDGLGTGIATARAVNIINRDHASKDEKRLVVEHLEKEAPCCLAIFVDREFDGEKNSKGMRIAMFYIGGVDDREALSYAWRMSRNMAVQLTVVRLVWDSPDDEFDEFDREYLRAFVYQTNDTPTVRYLEKVVKDEKETVQLLNRIGSKGFDLYIIGRGHGRKMSLAQTLDPVLDEPVFGPLGDTLTDLNSASKTSILIFQKEAESNDSEKHEHNASATTSQFSDGVMDQQQMYSPAVSFGPNYR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03013 836 MobiDBLite consensus disorder prediction 795 818 - -
Tsu07g03013 836 Pfam Sodium/hydrogen exchanger family 56 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu07g03013 836 Gene3D - 43 452 IPR038770 -
Tsu07g03013 836 PANTHER CATION/H + ANTIPORTER 16 802 - -
Tsu07g03013 836 PANTHER CATION/H+ EXCHANGER 3 16 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03013 Tsu-Chr7 35787380 35791459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03013 20 810 Antiporter Super Family AT2G13620 32.177 1.47e-136 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03013 - - aprc:113862236 1023.46