Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03003 atggaTAGTTCTAACAAGACGGTGGATTGTGGTAGTAGTGgtcatgaatttattaaaattgacAAGTTTCAAGATGATGGCGCATATTGGGAGCCTGCAACAGATATGTGTTTTTCTTCCGCGGACGACGTTAAATCTTTTTATGGAGAGTATGCTTTGCGAAGGGGGTGGAAGATTAGAACATCAAGAAAATGCCAAGATGGAGAAATATGTTACTTGATTCTGGCATGCTCAAGAGAGGGGTATGTAGTCTCTAAAGTTCCATGTACATTGAAGACAAATCCGACAAAGGTGAAAAAATGTCCTGCCAGGAGGTGTATCAAGATGGACACAGATGGATTGTGGTACATCACAAAATTTGATCCTAGCTATTTTCATGAGTGCAGCCCTACAAAGGCAAGTTTGTTCAAGGCTAACAAGAAAATTAACTTGCATGTGAAGAGGACTATTGAAATCAATGATGATGCAAGAGTGATGATCAACAAGACTTTCCAATATCTTGTTAAAGATACCGGGAGGGGGGGCATGAAAATATACCATTTTGTGAAAGAGACGTGA 558 0.3835 MDSSNKTVDCGSSGHEFIKIDKFQDDGAYWEPATDMCFSSADDVKSFYGEYALRRGWKIRTSRKCQDGEICYLILACSREGYVVSKVPCTLKTNPTKVKKCPARRCIKMDTDGLWYITKFDPSYFHECSPTKASLFKANKKINLHVKRTIEINDDARVMINKTFQYLVKDTGRGGMKIYHFVKET 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03003 185 Pfam FAR1 DNA-binding domain 46 129 IPR004330 -
Tsu07g03003 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 13 155 - -
Tsu07g03003 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03003 Tsu-Chr7 35676009 35676566 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g03003 FAR1 5.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03003 - K17604 cam:101510307 232.646