Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02989 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCAAAGCGGCTTGGAGATCTTCAGACTGGTCCACTACCTGTTGATCAAGGAGAGAATTGGGCTGAGCCTGCACAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGGGGAAGAGGTGGTAATGCTGCAGGTTTAGGTAAAGGGTCTTCACCAGCTGTACCTACAAGACGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATTTGGATCCTGAACCTTGTGAGGTACTTCCAGAACCTGTTGCATTAAGGGCTCAGGAACCTGTTTACAATCACGTAGAGGTAGTTGCCAATAATAACATTCTGATGGAGGGTGGAAGTGGTGATAAAGCGGCAGCAGCTGAAGAGGAAGCAACCACAACACCTGTCCCTGAGAGGGTACAAGTTGGTAACTCTCCTGTATATAAGACAGAAAGGAAGTTGGGTAAGGGTGGTTTTGGCCAAGTGTATGTTGGCAAAAGGGTTAGTGGTGGCTCTGATCGAGTAGGTCCTGATGCTATCGAGGTCGCACTCAAGTTTGAGCATAGAAACAGTAAAGGTTGTAATTATGGGCCTCCTTATGAGTGGCAAGTTTACAGTACTCTGAACGGTTGTTATGGCATTCCTGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTGATGGACATACTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCGCCAAGTATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATTCTTGAAAAGCTCCATTTGAAAGGGTTTGTGCACGGAGATGTAAAACCGGAAAACTTTTTGCTTGGTCAACCTGGAACGGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTAGCTTCTAAATGGAAGGACGCATCATCTGGTCAACATGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACATGCACATTTAGGTAGGACTGGCAGTCGAAGGGATGATCTTGAGTCACTGGCATACACATTGATATTTCTCATTAAAGGGAGATTGCCGTGGCAGGGTTACCAGGGTGACAATAAGAGTTTTCTtgtttgtaagaaaaaaatGTCCACTTCTGCGGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTTAAGCTGTTCCTAGAAGCAGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGACAGCTTGATTGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTGAAGgtCGGTCAAAAGCGAGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAGCCTAAGAAAAAAGTGCGATTGGGGAGTCCTGCTACTCAGTGGATATCTGTGTATAATGCACGCCGTCCCATGAAGCAGAgATATCACTATAACGTAGCGGACAATAGGCTCCGACAGCATGTAGACAAGGGTATTGAGGATGGGCTGTATATAAGCTGTGTGGCCTCTTCAGCAAATTTGTGGGCCCTAATCATGGATGCAGGAACGGGTTTTTCTTCCCAGGTTTATGAGTTATCACCGGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGCGCAGTTAATGGCAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTATACACAGCAATCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAacaagaaatggaaagaaggGTTCCATGTTACCTCCATGACTACCGCCGGCAGTCGTTGGGGTGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCAAGTGAAGGAATCCATCGTCGATGGGAGAATAATTACCGAATTACTTCTATGGCTGCTACCAATGATCAGGCAGCCTTCATTCTAAGCATACCAAAACGGAAATTAGTTGATGAAACTCAAGAGACTTTGCGGACATCTGCTTTCCCTAGCACCCATGTAAAGGAAAAATGGTCGAAGAATCTCTACATTGCCTCAATATGTTACGGACGAACTGTTTGCTAG 2127 0.4391 MPELRSGARRSKRLGDLQTGPLPVDQGENWAEPAQNRTRRRVGGGRGRGGNAAGLGKGSSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALRAQEPVYNHVEVVANNNILMEGGSGDKAAAAEEEATTTPVPERVQVGNSPVYKTERKLGKGGFGQVYVGKRVSGGSDRVGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPGVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSAELMCCFCPAPFKLFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATNDQAAFILSIPKRKLVDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02989 708 CDD STKc_CK1 147 421 - -
Tsu07g02989 708 MobiDBLite consensus disorder prediction 1 74 - -
Tsu07g02989 708 Gene3D Transferase(Phosphotransferase) domain 1 112 464 - -
Tsu07g02989 708 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Tsu07g02989 708 PANTHER CASEIN KINASE-RELATED 103 682 - -
Tsu07g02989 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Tsu07g02989 708 SMART serkin_6 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02989 708 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02989 708 PANTHER BNAA05G37270D PROTEIN 103 682 - -
Tsu07g02989 708 Pfam Protein kinase domain 147 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02989 708 SUPERFAMILY Protein kinase-like (PK-like) 147 434 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02989 Tsu-Chr7 35559220 35568342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02989 121 303 EF-hand Containing Proteins AT5G66210 27.604 3.44e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Tsu07g02989 Pkinase 1.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02989 - - gmx:100801967 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02989 07 35559220 35568342 Tsu07g02989 07 35559220 35568342 ECH