Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02984 ATGGATGTTTGTCAAAATGTATCAGTTTCTGCTGAGTGCAAACAGGAAAAGATCCTCAACCCTTCAAGTAGCCTTGATGACCTTTTTTCTGCTCAAAACATGGAAGTGAATGTTGAAATGGAATGGCTTTCAGTGTTTGTTGAAGATTGTTTTTCAAGCCCACAAAGCTGTGTCTTGTTACCTTCAAATGTTCAAAACACAACAAAACCTTCAAACACAACAAAGaaaccaaatcaacaacaagaacaaattGAGTCACCAATGCAAAATTTCACAGTACCAGGTAAAGCAAGAAGCAAAAGAAAGAGACTTTCAGCACCAAGAAGACCAAAAAACCCATtaagcattttatcaaacacctTAAACCCACAAAATGAATCACTTTGTTCTGACCCACCTCTTCTAAAACAAACTTATTGGTTAGCTGATAGTGAGCTCATTATACCTAAAGATGTAACAAAAGATGATGATTGTGATGATGAAGTTGTTGAAATTGTGAAAAAGGAAAAGTTTGATTTTGAGAATAATAATGATGTTGGTCAAAATCAAGTTCCAACAAGAAGATGTACACATTGTTTGTCACAAAAGACACCACAATGGAGGGCAGGCCCATTAGGCCCAAAAACATTATGCAATGCTTGTGGTGTTAGGTACAAATCTGGAAGGTTATTGCCTGAATATAGGCCTGCTAAGAGTCCTACTTTTGTGAGTTATTTGCATTCAAATTCTCATAAGAAAGTTATGGAAATGAGGATGAATGTTGTATCTTCTAATTCTAGTGAGTAG 786 0.341 MDVCQNVSVSAECKQEKILNPSSSLDDLFSAQNMEVNVEMEWLSVFVEDCFSSPQSCVLLPSNVQNTTKPSNTTKKPNQQQEQIESPMQNFTVPGKARSKRKRLSAPRRPKNPLSILSNTLNPQNESLCSDPPLLKQTYWLADSELIIPKDVTKDDDCDDEVVEIVKKEKFDFENNNDVGQNQVPTRRCTHCLSQKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMNVVSSNSSE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02984 261 Gene3D - 180 253 IPR013088 GO:0006355|GO:0008270
Tsu07g02984 261 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 186 247 - -
Tsu07g02984 261 SMART GATA_3 183 237 IPR000679 GO:0006355|GO:0043565
Tsu07g02984 261 CDD ZnF_GATA 188 235 IPR000679 GO:0006355|GO:0043565
Tsu07g02984 261 Pfam GATA zinc finger 189 223 IPR000679 GO:0006355|GO:0043565
Tsu07g02984 261 MobiDBLite consensus disorder prediction 61 93 - -
Tsu07g02984 261 ProSiteProfiles GATA-type zinc finger domain profile. 183 219 IPR000679 GO:0006355|GO:0043565
Tsu07g02984 261 MobiDBLite consensus disorder prediction 61 124 - -
Tsu07g02984 261 PANTHER GATA TRANSCRIPTION FACTOR 1 260 - -
Tsu07g02984 261 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 260 - -
Tsu07g02984 261 ProSitePatterns GATA-type zinc finger domain. 189 214 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02984 Tsu-Chr7 35490852 35492451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02984 38 251 C2C2-Gata Transcription Factor Family AT4G32890 41.818 1.35e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Tsu07g02984 GATA 3.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02984 - - gmx:100786479 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02984 07 35490852 35492451 Tsu07g02984 07 35490852 35492451 ECH
Tsu07g02984 07 35490852 35492451 Tsu03g02809 03 37897636 37899887 PCT