Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02971 ATGGAAGAACCAATTGTTGTTAACAAAGGTGAAGATCAAGTTCTTGATTTACCACCAGGTTTTAGATTCCATCCAACAGATGCAGagataattgttttttatctcACTGAAAAGGTGAAAAATAGTAAATTCAGTGCAACTGCTATTGGTGAAGCTGATTTGAACAAGTGTGAGCCTTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAAGAATGGTACTTTTTTTGTCAGAAAGATAGAAAATATCCAACAGGGATGAGAACTAATAGAGCAACAGTTTCTGGTTACTGGAAAGCTACAGGAAAAGACAAAGAAATTTATCACAAAGGAAAATCAAATCTTGTTGGTATGAAGAAAACTCTTGTGTTCTATAGAGGAAGAGCTCCAAAAGGTGAAAAAACTAATTGGGTTATGCATGAATTCAGATTAGAAGGCAAATTTGCTACTCACAATCTCCCTAAAGCTGAAAAGgATGAATGGGTTGTGTCAAGGGTTTTTCACAAGAACACAGATGTTAAGAAACCTCAAATTTCTGGTCTTTTAAGGATAAACTCAATTGGTCATCATGATGATCTTTTAGATTATTCTTCACTTCCACCTCTTATGGATCCTTCATACACAAATGATGATTTCAAAGGAATTACAAATCAACAAATTTCATCAACTAAATCACAATCAGATGGATATTATCTTCCAAGTTTCTcaatcaacaatcaacaaaaccAATTTGTTATGAAGCCAGAAGATAATTACCATAGAATAATTAACTAtgataatcatcatcatcatcatgagaTTAATCCAACCATGAACAACAACTACACTTCAAATTCCAAttcaaaccaaacaaatctcAACAACCCAATTGGAAACACACTCTCACAAcctcaaatccaaatccaaaatccAAACTTGAATTACTTTATGTATCAAAATAGGATTAATCAAAGTTCCATGCCAACATTTGGAAACAATAATGAGTGCAAAATGGAACAATTCTCTTCAAACCAATCACAAGATACAGGTCTTAGCAATGACACGTCATCGGCCGTATCCAAACAAGACATGGGAAGGAATAGGACAATGTATGAAGATCTTGAAGGTCCTTCATCAGTTGCACCTCTCTCAGATTTGGAAAGTTTTTGGGACTATTGA 1158 0.3143 MEEPIVVNKGEDQVLDLPPGFRFHPTDAEIIVFYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATVSGYWKATGKDKEIYHKGKSNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFATHNLPKAEKDEWVVSRVFHKNTDVKKPQISGLLRINSIGHHDDLLDYSSLPPLMDPSYTNDDFKGITNQQISSTKSQSDGYYLPSFSINNQQNQFVMKPEDNYHRIINYDNHHHHHEINPTMNNNYTSNSNSNQTNLNNPIGNTLSQPQIQIQNPNLNYFMYQNRINQSSMPTFGNNNECKMEQFSSNQSQDTGLSNDTSSAVSKQDMGRNRTMYEDLEGPSSVAPLSDLESFWDY 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02971 385 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 380 - -
Tsu07g02971 385 MobiDBLite consensus disorder prediction 319 357 - -
Tsu07g02971 385 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
Tsu07g02971 385 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100-LIKE 9 380 - -
Tsu07g02971 385 ProSiteProfiles NAC domain profile. 17 169 IPR003441 GO:0003677|GO:0006355
Tsu07g02971 385 Gene3D NAC domain 26 174 IPR036093 GO:0003677|GO:0006355
Tsu07g02971 385 MobiDBLite consensus disorder prediction 319 358 - -
Tsu07g02971 385 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02971 Tsu-Chr7 35309469 35311384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02971 1 207 NAC Transcription Factor Family AT5G18270 70.423 1.15e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g02971 NAM 4.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02971 - - aprc:113861501 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02971 07 35309469 35311384 Tsu07g02971 07 35309469 35311384 ECH