Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02969 ATGGAAACCCCACAAACCAATTTGCCCCCTGGTTTTAGGTTCCACCCTACCGATGCAGAACTCATTCTTCACTATCTTAGGAAAAAAATTGCCTCCATTCCTTTGCCTGTTTCCATCATTGCTGAAGTTGATATTTATAAGTTGGACCCTTGGGATTTACCAGCTAAGGCTTTGTTTGGTGAGAAAGAATGGTATTTTTTTAGTCCTAGAGATAGGAAGTATCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCAACTGGCACTGATAAGACCATAGTTGCATCATTGCCAATTGGAGGAGGAAGAGCACAAGAGAACATTGTTGGTGTTAAAAAGGCTCTTGTATTTTATAAAGGGAAACCCCCAAAGGGTATTAAGACTAATTGGATCATGCATGAATATCGTCTTGTTGACAATAATAAACCTATTAAGCTCAAAGATTCTTCGATGAGGTTGGATGATTGGGTACTATGCCGAATTTACAAGAAATCTAAATGCGCACTAACTTCATCAGAATCATCATCAGAAACAATGGTGGGTGACGTAGAACACGCGGAAGATCAGGAATTGAAGGAGGGGTTAGGACTTGTTTGGTGTAGTAACCAAAGGACTGGATACTTTGCAAAATTCGAGAAAGCACTCGATGGAGTATTTGAATTTGGCCACCATGAAATTTCGGTGATCTCTCAGCTATTCACACAATGGGTTACCCCTAGAGTATTCACCCATTGTCTGAGAGGAGACATGAATGGTGAAGGAGCATTGGTCCTGGGCGAAATTGTGGAGCCTGACATTGTTTATACATCGCTTGTTCCATCATCTTCCACCTACATTTTGACACTCTGCCAAGGATTTGTGACTCAAAATTATTCAGCTTCTATTGTTTTTGGGTGTAGTAACCAAAGGACTGGATACTTTGCAAAATCCGAGAAAGCACTCGATGGAGTATTTGGATTTGGCCACCAAGAAATTTCAATGATCTCTCGGCTTTCTGCACAAGGGGTTACTCCTAGAGTATTCTCCCATTGTCTTAGAGGAGACATCAATGGTGGAGGAGTATTGGTCTTGGGCGAAATTGTGGAGCCTAACATTTTTTATACACCGCTTGTTCCATCACAGTGTATTAACCAAAGGACTGGATACTTTGCAAAATCCGAGAAAACACTCGATGGAGGATTTGGATTTGGCCGCCAAGAAATTTCAGTGATTTCTCAGCTTTCCGCACTACGGGTTACTTCTAGAGTATTCTCCCATTGTCTGAGAGGAGACATCAATGGTGGATGA 1302 0.4201 METPQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWDLPAKALFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPIGGGRAQENIVGVKKALVFYKGKPPKGIKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALTSSESSSETMVGDVEHAEDQELKEGLGLVWCSNQRTGYFAKFEKALDGVFEFGHHEISVISQLFTQWVTPRVFTHCLRGDMNGEGALVLGEIVEPDIVYTSLVPSSSTYILTLCQGFVTQNYSASIVFGCSNQRTGYFAKSEKALDGVFGFGHQEISMISRLSAQGVTPRVFSHCLRGDINGGGVLVLGEIVEPNIFYTPLVPSQCINQRTGYFAKSEKTLDGGFGFGRQEISVISQLSALRVTSRVFSHCLRGDINGG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02969 433 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Tsu07g02969 433 SUPERFAMILY Acid proteases 294 387 IPR021109 -
Tsu07g02969 433 PANTHER OS01G0104200 PROTEIN 5 188 - -
Tsu07g02969 433 Gene3D Acid Proteases 370 433 IPR021109 -
Tsu07g02969 433 Gene3D Acid Proteases 273 363 IPR021109 -
Tsu07g02969 433 Pfam Xylanase inhibitor N-terminal 213 264 IPR032861 -
Tsu07g02969 433 Pfam Xylanase inhibitor N-terminal 296 363 IPR032861 -
Tsu07g02969 433 PANTHER NAC TRANSCRIPTION FACTOR 56 5 188 - -
Tsu07g02969 433 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
Tsu07g02969 433 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Tsu07g02969 433 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Tsu07g02969 433 SUPERFAMILY Acid proteases 380 429 IPR021109 -
Tsu07g02969 433 SUPERFAMILY Acid proteases 205 287 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02969 Tsu-Chr7 35268217 35276035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02969 4 193 NAC Transcription Factor Family AT3G04070 69.430 2.01e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g02969 NAM 8.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02969 - - pvu:PHAVU_001G100200g 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02969 07 35268217 35276035 Tsu07g02969 07 35268217 35276035 ECH