Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02968 ATGATGAATGTGCTCCTCCAATTCATAACTTGTTTCAAAATGGGTTTGCATTTGCCAAAAACCAAGAGCATGGAGTTTCTAACTAACCTCTTCACTATTCTACTCTTCTTAACCCCTGCATTCTCTTCCACCCAATATCTTGGAAACAATCGTAAGATATTCCCAAAACAAGAAACAGTTACCTCGTACGCTGTCGTCTTTGATGCTGGTAGCACCGGTAGCCGTGTTCATGTCTACCATTTTGATCAGAACTTAGATCTTCTTCACATTGGCAATGATGTTGAATTTTATAATAAGacAACACCCGGTTTAAGTGCTTATGCAGATAATCCGAAGCAAGCAGCAGAATCTCTGATTCCACTTTTAGAGCAAGCAGAAAATGTGGTTCCTGTGAATCAGCAGCCCAAAACACCTGTTAGGCTTGGGGCAACGGCAGGTTTAAGGCTTTTGGATGGGAATTCTTCGGAATTGATATTGGAAGCGGTTTCAAATTTGCTTAGCAACAGAAGCACTTTTAACGTTCAATCTGATGCAGTAGGAATTATTGATGGAACTCAAGAAGGTTCTTATTTGTGGGTGACAATTAACTATGTTTTGGGAAAGTTGGGAAAAGAATTTTCTGAGACAGTAGCAGTAGCTGATCTTGGAGGTGGATCAGTTCAAATGGTATATGCAATTTCAAGAAACCAAGCAAGAAAAGCTCCAAAAGTACCTAAGGGAGAGGATCCATACATAAAAAAGATTGTACTTAAAGGACATAAATATTACCTCTATGTTCACAGTTACTTGCGCTTTGGCAAAGAAGCATCTCGTGCAGAAATTTTGAAGGTCACTAATGGTTCTCCTAATCCTTGCATTTTAGCCGGCTATGATGGGACTTATACATATTCAGGAGAGGAGTATAAGGCCTATGCCCCAGCTTCTGGCTCCAGCTTTGACAAATGTAGAGAGATCATTCGTAAGGCCCTTAAAGTGAATCATTCATGTCCCTATTCAAGTTGCACTTTTAATGGAGTATGGAGTGGTGGAGGAGGAAGAGGACAGAGAACTCTTTACACTACTTCCTCATTTTATTATGTGCCTGAAAATattGGTATTATTGAGGCAAATACGCCCAATTCCAAAGTTTTTATCGAGGAATTGAAGGCCGCAGGTGAGGAAGtttgtaaaacaaaatttaaggaTGCCAAAGCCAAATTTCCACGTCTTGATGAGTCAAGTCTTCCATATGCATGCTTGGATCTTACTTATCAGTATACTTTGTTCGTTGATGGATTTGGACTAGATCCACTTCAACGGATTACAGTGGCAAATCAAATTGAATATCAAGGTGCTGTTGTGGATGCAGCATGGCCTCTTGGCAATGCAATAGAAGCTATATCATCATTGCCTAAATTTGATCGTTtcatgtattttatttaa 1422 0.3896 MMNVLLQFITCFKMGLHLPKTKSMEFLTNLFTILLFLTPAFSSTQYLGNNRKIFPKQETVTSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGNDVEFYNKTTPGLSAYADNPKQAAESLIPLLEQAENVVPVNQQPKTPVRLGATAGLRLLDGNSSELILEAVSNLLSNRSTFNVQSDAVGIIDGTQEGSYLWVTINYVLGKLGKEFSETVAVADLGGGSVQMVYAISRNQARKAPKVPKGEDPYIKKIVLKGHKYYLYVHSYLRFGKEASRAEILKVTNGSPNPCILAGYDGTYTYSGEEYKAYAPASGSSFDKCREIIRKALKVNHSCPYSSCTFNGVWSGGGGRGQRTLYTTSSFYYVPENIGIIEANTPNSKVFIEELKAAGEEVCKTKFKDAKAKFPRLDESSLPYACLDLTYQYTLFVDGFGLDPLQRITVANQIEYQGAVVDAAWPLGNAIEAISSLPKFDRFMYFI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02968 473 Pfam GDA1/CD39 (nucleoside phosphatase) family 59 463 IPR000407 GO:0016787
Tsu07g02968 473 CDD NBD_sugar-kinase_HSP70_actin 65 224 - -
Tsu07g02968 473 Gene3D - 63 457 - -
Tsu07g02968 473 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 182 197 IPR000407 GO:0016787
Tsu07g02968 473 Gene3D Exopolyphosphatase. Domain 2 183 441 - -
Tsu07g02968 473 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 24 473 - -
Tsu07g02968 473 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 24 473 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02968 Tsu-Chr7 35222864 35230860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02968 62 462 Calmodulin-binding Proteins AT3G04080 54.726 4.62e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02968 K14641 - gmx:100781628 639.802