Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02941 ATGCCTCCACGTGATCAAATATCTCGTGTCACTAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAATATCAAAAGTAGGGTAAACCGACAATCTGTGCTTGGGGCCATTACTTCTGCTCAACAGAGGTTGAAACTATATAACAAGGTTCCTCCAAATGGATTGGTCCTTTATACTGGTACCATTCTCACTGATGACGGCAAGGAAAAGAAAGTGACAATTGATTTTGAACCTTTCAAACCAATCAATGTATCACTTTATCTCTGCGATAACAAGTTTCATACAGAAGCTCTAAATGAACTTCTAGAATCTGATGACAAGTTTGGTTTTATTGTTATGGATGGTAATGGAACCCTTTTCGGAACTTTAAGTGGAAATACTCGTGAGGTGCTTCATAAGTTTACTGTCGATCTACCAAAGAAACATGGTAGAGGAGGGCAGTCAGCTTTGCGTTTTGCTCGTCTTCGCATGGAAAAACGACACAATTATGTTAGGAAGACTGCAGAGCTTGCTACTCAGCATTACATCAACGCTGCTACTAGTCAGCCTAATGTTGCTGGACTCATTCTTGCTGGTTCGGCTGACTTCAAGACTGAGCTGAGCCAGTCAGATATGTTTGATCCACGTTTGCAAGCAAAAATATTGAACGTGGTTGATGTTTCCTATGGTGGGGAAAATGGCTTTAACCAAGCTATTGAATTATCTGCAGAGATTCTATCTAATGTGAAGTTCATACAAGAGAAACGCTTGATAGGAAAATATTTTGAAGAGATAAGCCAAGAAACCGGGAGATATGTTTACGGAGTTGATGACACATTGAAGGCCCTAGAGATGGGTGCTGTTGAAACACTCATTGTATGGGAGAATTTGGATATTAATAGGTATGTGCTGAAAAATGCTACCACCGGTGAGATTGTAATAAAGCATTTGAAGAAGGAACAAGAAGCTGATCAAAGCAACTTCCGCGATCCGGCTACCAATGCAGACTTGGAGGTTCAGGAGAAGATGCCATTACTTGAGTGGTTTGCGAATGAGTACAAAAAATTCGGATGCTCGCTGGAATTTGTGACCAACAAATCTCAAGAAGGGTCACAGTTTTGCAGGGGGTTTGGTGGTATTGGAGGTATGCTTCGCTACCAGCTTGATATCAGATCATTTGATGAGTTATCTGATGATGATGGTGGAGTGTACGAGGATTCCGATTAA 1206 0.4104 MPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFEPFKPINVSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQHYINAATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQETGRYVYGVDDTLKALEMGAVETLIVWENLDINRYVLKNATTGEIVIKHLKKEQEADQSNFRDPATNADLEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDIRSFDELSDDDGGVYEDSD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02941 401 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 2 380 IPR004403 GO:0003747|GO:0006415
Tsu07g02941 401 Pfam eRF1 domain 3 244 381 IPR005142 -
Tsu07g02941 401 SUPERFAMILY L30e-like 241 383 IPR029064 -
Tsu07g02941 401 Gene3D eRF1 domain 1 1 98 IPR024049 -
Tsu07g02941 401 Gene3D eRF1 domain 2 99 240 IPR042226 -
Tsu07g02941 401 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 401 - -
Tsu07g02941 401 Gene3D - 242 401 IPR029064 -
Tsu07g02941 401 SUPERFAMILY Translational machinery components 105 239 - -
Tsu07g02941 401 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 401 IPR004403 GO:0003747|GO:0006415
Tsu07g02941 401 Pfam eRF1 domain 2 107 240 IPR005141 -
Tsu07g02941 401 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 1 103 IPR024049 -
Tsu07g02941 401 SMART eRF1_1_2 1 103 IPR005140 -
Tsu07g02941 401 Pfam eRF1 domain 1 2 101 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02941 Tsu-Chr7 34823317 34824522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02941 1 401 Eukaryotic Initiation Factors Gene Family AT3G26618 91.022 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02941 K03265 - tcc:18601188 757.673