Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02895 ATGTCAATTTCTCTTGCGGCGATAATAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATATCTATACTACTTATATGGTTTTGCTTGTTTCGCCAAACAAGTGTTTCGAGGACTTCTGAGACAGGGTCATCTGATCCTTCACAAGGAATTCCATTACATGCAGTGGGAAGACATGGTGGAATGGAGTCACAAATGCGAGATACTAGGCGTTTTGCGATGGAAGAACTTTCACATGCAACAAAGAATTTCAGTGACAAAAATTTGATTGGAGAAGGAAAATTTGGTGAGGTTTACAAAGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAGAAGCGTCGCGCTGCCACAAGCCAGGAATTTGTTGACGAGGTGCGTTATCTTTCAGCTATTCAACATCGGAATCTTGTAACTCTTATCGGATACTGCCAAGAAAACAATCTAcagtttcttatatatgaataCGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTAGTCAACAACCGCGGGAGAAGCTAGAATTCAAGCATAGACTCTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTTTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACATCTAATGTTCTTGTCGACGAAAACTTCATTTCTAAGGTCGCGGATGCAGGGCTTCGTAATTTTCTAGGGAGAGTTGACATTGCTGGCTCATCTTCTCAAGTGGCATCAGACGAGATATTCCTTGCACCAGAGGTGAGAGAGTTCAGACAATTTTCTGAGAAGAGCGATGTGTATAGCTTTGGGGTATTTTTGCTAGAATTGTTGAGTGGGAAGGAAGCAACAGAATCACCCTCTATAAACACAAGTCAAAATCTGGTTGAATCGGTGCTAAGTAATCAAGACAGTAGCATTATGTCTACGATCATTGATCAAAGAATGGAGAGTAGATTTACAGCTGAAGGCATGGAAAATTACATCCTACTCTTAATAAGATGTTTAGATCCTTCAAGTGAAAGAAGACCTTCCATGAGCTATGTCGAAATGGAACTCGATCGAATCCTCGAAAAAGAGATGAACTTGACAACAATGATGGGTGAAGGAACACCAACTGTGACTCTTGGAAGTCAAttattcaaatcaaataaataa 1158 0.4093 MSISLAAIIGGAAGAVALVGISILLIWFCLFRQTSVSRTSETGSSDPSQGIPLHAVGRHGGMESQMRDTRRFAMEELSHATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRAATSQEFVDEVRYLSAIQHRNLVTLIGYCQENNLQFLIYEYVPNGSVSSHLYGASQQPREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTSNVLVDENFISKVADAGLRNFLGRVDIAGSSSQVASDEIFLAPEVREFRQFSEKSDVYSFGVFLLELLSGKEATESPSINTSQNLVESVLSNQDSSIMSTIIDQRMESRFTAEGMENYILLLIRCLDPSSERRPSMSYVEMELDRILEKEMNLTTMMGEGTPTVTLGSQLFKSNK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02895 385 Pfam Protein tyrosine and serine/threonine kinase 88 352 IPR001245 GO:0004672|GO:0006468
Tsu07g02895 385 SUPERFAMILY Protein kinase-like (PK-like) 64 350 IPR011009 -
Tsu07g02895 385 MobiDBLite consensus disorder prediction 38 61 - -
Tsu07g02895 385 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 385 - -
Tsu07g02895 385 ProSiteProfiles Protein kinase domain profile. 84 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02895 385 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Tsu07g02895 385 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 385 - -
Tsu07g02895 385 Gene3D Phosphorylase Kinase; domain 1 56 156 - -
Tsu07g02895 385 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02895 Tsu-Chr7 34196136 34200202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02895 1 358 Receptor kinase-like Gene Family AT1G30570 36.000 3.58e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Tsu07g02895 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02895 - - cam:101513575 660.988