Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02892 ATGGATAATGATAGAGATGCTAATGATGTTGAAATGAACAATGGTAATGATATGCAtaatgaggaagaagaagaggattTGGATGATTATACACCTATAGATCAATTCACAGATGATGATATAAGAGAGATGGAATTTGAATCAGAGCAAAAAGTTGTCGAGTTTTATGAAATGTATGCTGAATATCATGGGTTCGCTGTAAGAAAAGATTTTAAGGAATGTGATATTGAAGGGAATATTGTTAGGCGCCAATTAGTTTGTAATAGAAAAAGTTTGAGACATAAAAAACATATGTTACGGGTGGACAAATGCAGGGAGCCAAGGCAAGTTACTCGAACAGGTTGTCGTGCTCGGATTCATGTGGCATATAATATTGAGACTAAGCGTTGGAGAGTTGTTGCATTTGAGTCTGTTCATAGTCATGAGTTAATTCCACGAAATTTCGTTCATTTTATTCCTAAGTATCGTCGATTGAGTGAAGCTGATAAAGCGCTCGTTGATGGCTTGCATACATGTGAAGTTAGAACATGtcatattttgggttttatgaTGGCTCAGAAAGGTGGTCATGAAGGCTTGAGATTCATCAAGAAAGACCTATATAACTACTTTAGTAATGGAGCTAAGGCTAGAAGGGAAAATGAGGATGCTATTGCTGCTTTGAGTTATTTCCAGTCTAAAGCTGATAATGAACCGATGTTTTATTCGAAGTTTACAATAGACAATGGTCATCTACAAAATTTGTTTTGGTCAGATGGAACTAGCCGATTTGACTTTGAATGTTTTGGTGACGTGCTTGCATTTGACACGACCTACAAAAGGAACAAGTACAACAAGCCATTTGTTATTTTCAGTGGGTTGAATCATCATGGTGAAACTACAATTTTTGGGTGTGCTTTAATTTCTGATGAAACGACTGATACATATAAGTGGCTTTTAAATACCTTGTCTGacgcaatgttttaa 966 0.3427 MDNDRDANDVEMNNGNDMHNEEEEEDLDDYTPIDQFTDDDIREMEFESEQKVVEFYEMYAEYHGFAVRKDFKECDIEGNIVRRQLVCNRKSLRHKKHMLRVDKCREPRQVTRTGCRARIHVAYNIETKRWRVVAFESVHSHELIPRNFVHFIPKYRRLSEADKALVDGLHTCEVRTCHILGFMMAQKGGHEGLRFIKKDLYNYFSNGAKARRENEDAIAALSYFQSKADNEPMFYSKFTIDNGHLQNLFWSDGTSRFDFECFGDVLAFDTTYKRNKYNKPFVIFSGLNHHGETTIFGCALISDETTDTYKWLLNTLSDAMF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02892 321 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Tsu07g02892 321 PANTHER OS02G0262500 PROTEIN 40 320 - -
Tsu07g02892 321 MobiDBLite consensus disorder prediction 18 34 - -
Tsu07g02892 321 Pfam MULE transposase domain 265 317 IPR018289 -
Tsu07g02892 321 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 320 IPR031052 GO:0006355
Tsu07g02892 321 MobiDBLite consensus disorder prediction 1 17 - -
Tsu07g02892 321 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02892 Tsu-Chr7 34138492 34139457 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g02892 FAR1 9.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02892 - - ccaj:109792835 348.591