Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g02879 | ATGCAAGAAACTACTATTGTATCGTGGCTTTCTCAAATGAATGTTCCTCGGGATGCTTTTAGGTTGGTAGTGGCAAAAATATTGGAATGTGCTCGTGATATGGTTAAGACACATAAGAATCTAATGATTCTTCCTATTCGAGTCAATCTTGTCGTTACAAGAGCTAGCGAAGATGAAAGTGATGAAGATGACGGTGATGGAAGCGATGAAAATATCCAAAGCGATGAAACGGAAAAGTCATGTGTTGAAGAGGGATCGAAGACGGTGAAAGTTGGAATAGAGGAAAACTGTgcaatttgttttgaaaattttaattttaatgttggAGTTCCTATGCCATGTATGCACGTGTTTCATATAAAATGTATCCGTGATTGGTTAGAGAAAGGCAATACATGTCCGATATGTAGGTTTAAGTTGTCCACTAATTAA | 432 | 0.3542 | MQETTIVSWLSQMNVPRDAFRLVVAKILECARDMVKTHKNLMILPIRVNLVVTRASEDESDEDDGDGSDENIQSDETEKSCVEEGSKTVKVGIEENCAICFENFNFNVGVPMPCMHVFHIKCIRDWLEKGNTCPICRFKLSTN | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g02879 | 143 | MobiDBLite | consensus disorder prediction | 55 | 84 | - | - | |
Tsu07g02879 | 143 | SUPERFAMILY | RING/U-box | 96 | 141 | - | - | |
Tsu07g02879 | 143 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 49 | 140 | - | - | |
Tsu07g02879 | 143 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 87 | 141 | IPR013083 | - | |
Tsu07g02879 | 143 | SMART | ring_2 | 97 | 136 | IPR001841 | - | |
Tsu07g02879 | 143 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
Tsu07g02879 | 143 | Pfam | Ring finger domain | 96 | 137 | IPR001841 | - | |
Tsu07g02879 | 143 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 137 | IPR001841 | - | |
Tsu07g02879 | 143 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 49 | 140 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g02879 | Tsu-Chr7 | 33987334 | 33987765 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g02879 | 44 | 140 | C3H Transcription Factor Family | AT1G14200 | 32.323 | 6.43e-11 | 55.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g02879 | - | - | cam:101499491 | 154.066 |