Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02871 ATGGGGACCACAAGTACCCCTGCTTTTCCTTCTGCTCTTATTTATGATGGGGCTCAATTTCATGTTACCGATCCAATcaatggtggtggtggagaaGGTTCGTTGAGCTCTAAGAAAAGGTTCAGGACTAAATTTAGTCATGAACAAAAGGAGCAGATGTTGGATTTCGCAGTGAAAATTGGTTGGAGGATTAAGAAACATGATCAAAATGTTGTTGAGATTTTTTGCAACAAGATTGGGGTGAAGTTTCAAGAGTTTAAGTGCTTGGACGATATCATCTTGAAAGATGAAGGGTTAGTTGGTTTGTAG 309 0.3657 MGTTSTPAFPSALIYDGAQFHVTDPINGGGGEGSLSSKKRFRTKFSHEQKEQMLDFAVKIGWRIKKHDQNVVEIFCNKIGVKFQEFKCLDDIILKDEGLVGL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02871 102 Gene3D - 25 89 - -
Tsu07g02871 102 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 35 87 - -
Tsu07g02871 102 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 35 87 - -
Tsu07g02871 102 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 38 87 IPR006455 -
Tsu07g02871 102 SUPERFAMILY Homeodomain-like 28 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02871 Tsu-Chr7 33867151 33867676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02871 36 87 ZF-HD Transcription Factor Family AT1G75240 61.538 2.45e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02871 - - cam:101499630 82.4185