Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02860 ATGGATAGATACACGCTACCCTTACCACCACAAGGTGGAGTTCACAATACTCTCACTATACCTTCTTGGTCCGAACCTCAACAAGAATCACCATCTTCATGGTCCACACCTAACTCCGAACCTAAACACAACAACACCACCGAACAAGACAACATTGCCATTGCTATTGCTATGGGTGCTACCTCTCTTCCTTTCTTCAAACCtgaaccacaacctgaacctgATAACTTTTACAACAACAATagcaacagcaacaacaacaacgttgTTAATGCTATTAATAATGTTCCATTTGTTTCAAATCCAACAACAATAACTGATAATTTTCTCATGCACCAAAACACAAACACCTTAGATTCAAATCCACACTCTTTCTTCCATAACAATAACAACTACTTTTTCAACAATaataccaacaacaacaacaacaacccatTTGAAATgggttttgaaaatggattcTTTATGGGAAACAACAACGCGTCAAATTCCCCTGTTTTCATGGGTGGGTCACTTGAGCTGAGTTCAGCTTCCGAGTTTCCACCGAGTCTTGAACTCGATGCTTCAGTAACACCTTTTAGTGCTTCTTTTTCTATGCCTCTTGAACTCTCTCAACCTCAAccacaacaacatcatcaacaacaacccaCGACGCTCTTTCAGAAGCGTCGTGGGGCGTTGGAGATTCCGAGGCTGGAGACTGTTGGgaacaaaaagaagagaaaagtgGAGAAGAAATGGGAAGAAGAAggaagtggtggtggtggtggtggtgatgttGATGGTGAtattgatgatttttctgggttgaaTTATGATTCTGATGAGAATGGAAATGATTTGAACAATTCTAATGGAACTGTTGTTACTGGTGGAGATCAAAAggggaagaaaaagaaagggctTCCTGCGAAAAATCTGATGGCTGAGAGACGCCGGAGGAAGAAACTCAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAAGATTAGCAAGATGGACAGAGCTTCAATACTTGGGGATGCAGTTGACTACTTGAAGGAGCTACTGCAGCGGATTAATAATCTTCATAATGAACTGGAATCAACTCCACCTGGCTCATTGTTGCAACCTTCTGCAAGTGCAAGCTTTCACCCGTTGACACCTACTCCGCCGACTCTTCCATGTCGAGTCAAGGAGGATCTATATCCTGGTGACTTGCTAAGCCCCAAAAACCAATCTCCAAAGGTGGAAGTTAGGGTAAGGGAAGGGAGAGCTGTGAACATTCATATGTTTTGTACACGCAGACCTGGACTTTTGCTTTCAACCATGAGGGCTTTGGATAACCTTGGATTGGATGTTCAGCAGGCTGTTATTAGTTGTTTCAATGGCTTTGCTTTAGATGTGTTCAGAGCCGAGCAATGCAGAGAAGGCCAAGATGTCCTCCCGGAGCAAATTAAAGCAGTGTTGTTGGATTCAGCGGGCTACCATGATGCATTGCTTCTTGTTCCTGTTGTCTCCTCTCATCTCAACACCTGTCAACCTCTTTCccacaatcaaaacaaaaagGTTgtttctttcattcattcaacTTACTATTACGTAATTCTCATTCGAATAACCATGGCAATGCAACTTGGAAGTTGCATTAAGACCATATTCCCTGAATCAACTACAAGGAAAACCTTGCATTGCCAATCAACGTTGTTGTTGCCGTGTCGAATCGGGTACACAGCGCGTGTTTCTCACATTTCCCTTGTGAGGAAGGTATCATCATCAATTGATGCAATTAGAGTCAGTTGTTGCAGCAATAATGGGAGTGAAAGTGGTGTGGTGGCTGAAAAAGTGGAAGAAACTGAAAAAAGTTATACTTGTGTTATGAAATTTGGTGGGTCTTCTGTTGCTAATGCTGTTAGGATCAGAGAAGTTGCAAATCTTATACTCAGTTTTCCTCAAGAGAGGCCTATCATTGTTCTCTCTGCTATGGGAAAAACCACTAACAGGCTTTTACTGGCTGGAGAAAAAGCTGTAAGCTGTGGAGTTACTAATGCTGATAGTATCGATGAGCTCAGTGATATAAAAGACTTGCATCTCAGGACAGTGGAGGAACTTGGAGTAGACAGAAATGTTATTGCAAAGCATCTAGAAGAATTGGAGCAACTTCTGAAGGGGGTTGCTATGATGAAAGAATTGACTCCACGGACGCAGGATTACTTAGTTTCATTCGGAGAGTGCATGTCCACTAGGATCTTTGCTGCATATCTTAATACATTAGGTGTTAGGGCTCGTCAATATGATGCATTTGAGATTGGTTTTATAACAACTGATGACTTCACAAATGCCGACATTTTGGAAGCAACATATCCAGCTGTTGCGAAGAGGTTACATGGTGATTGGGTTTCTGATCCTGCAATTCCAATTATTACAGGCTTCCTTGGAAAGGCCCGGAAATCATGTGCAGTGACAACATTGGGTAGAGGGGGCAGTGATTTGACAGCTACAACAATTGGAAAAGCACTAGGATTGCCAGAGATTCAGGTATGGAAAGATGTTGATGGTGTTCTAACCTGTGATCCAAATTTATGCCCGCAAGCAGAACCTGTTCCATTTTTGACATTTGATGAGGCTGCTGAGCTTGCATACTTCGGTGCTCAGGTCCTGCATCCACAGTCTATGAGACCTGCTAGAGAAGGTGATATTCCTGTTAGGGTTAAAAATTCTTACAACCCTAAAGCTCCGGGTACCCTCATCACCAAAACAAGAGACATGAGCAAGGCATTATTAACTAGCATTGTTTTGAAACGTAATGTTACCATGTTGGATATTGTAAGCACTCGCATGCTTGGGCAGTTTGGGTTCCTTGCTAAGGTGTTTTCAATCTTCGAAGATTTAGGCATATCAGTTGACGTTGTAGCTACTAGTGAGGTTAGTATTTCCTTGACGTTGGATCCGTCAAAGCTATGGAGCAGAGAGCTAATTCAACAGGAACTTGACTATGTTGTTGAAGAACTGGAAAAAATTTCTGTGGTGAATCTCCTAAAGAATAGATCCATAATCTCGCTCATTGGAAACGTTCAGATGTCGTCACTAATACTGGAGAAGGCCTTTCAAGTTCTTCGTACCCTTGGAGTCACTGTTCAAATGATTTCTCAGGGTGCCTCTAAGGTGAATATCTCATTAGTTGTAAACGACAGTGAAGCAGAGCAGTGTGTCAGGGCTCTCCATAAAACCTTCTTTGAGTGTGGTGAGCTCTCTGAATTAAAGAATGAACGCATTCCTGAAAATGGTTCTGTTTCTGCATTATCTTAA 3291 0.3895 MDRYTLPLPPQGGVHNTLTIPSWSEPQQESPSSWSTPNSEPKHNNTTEQDNIAIAIAMGATSLPFFKPEPQPEPDNFYNNNSNSNNNNVVNAINNVPFVSNPTTITDNFLMHQNTNTLDSNPHSFFHNNNNYFFNNNTNNNNNNPFEMGFENGFFMGNNNASNSPVFMGGSLELSSASEFPPSLELDASVTPFSASFSMPLELSQPQPQQHHQQQPTTLFQKRRGALEIPRLETVGNKKKRKVEKKWEEEGSGGGGGGDVDGDIDDFSGLNYDSDENGNDLNNSNGTVVTGGDQKGKKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNELESTPPGSLLQPSASASFHPLTPTPPTLPCRVKEDLYPGDLLSPKNQSPKVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVLPEQIKAVLLDSAGYHDALLLVPVVSSHLNTCQPLSHNQNKKVVSFIHSTYYYVILIRITMAMQLGSCIKTIFPESTTRKTLHCQSTLLLPCRIGYTARVSHISLVRKVSSSIDAIRVSCCSNNGSESGVVAEKVEETEKSYTCVMKFGGSSVANAVRIREVANLILSFPQERPIIVLSAMGKTTNRLLLAGEKAVSCGVTNADSIDELSDIKDLHLRTVEELGVDRNVIAKHLEELEQLLKGVAMMKELTPRTQDYLVSFGECMSTRIFAAYLNTLGVRARQYDAFEIGFITTDDFTNADILEATYPAVAKRLHGDWVSDPAIPIITGFLGKARKSCAVTTLGRGGSDLTATTIGKALGLPEIQVWKDVDGVLTCDPNLCPQAEPVPFLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKTRDMSKALLTSIVLKRNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKLWSRELIQQELDYVVEELEKISVVNLLKNRSIISLIGNVQMSSLILEKAFQVLRTLGVTVQMISQGASKVNISLVVNDSEAEQCVRALHKTFFECGELSELKNERIPENGSVSALS 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02860 1096 CDD bHLH_AtAMS_like 304 368 - -
Tsu07g02860 1096 CDD ACT_UUR-ACR-like 423 483 - -
Tsu07g02860 1096 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 304 369 IPR036638 GO:0046983
Tsu07g02860 1096 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 301 350 IPR011598 GO:0046983
Tsu07g02860 1096 MobiDBLite consensus disorder prediction 15 46 - -
Tsu07g02860 1096 MobiDBLite consensus disorder prediction 203 303 - -
Tsu07g02860 1096 CDD ACT_AK1-AT_1 931 1008 - -
Tsu07g02860 1096 TIGRFAM asp_kinases: aspartate kinase 619 1074 IPR001341 GO:0004072|GO:0008652
Tsu07g02860 1096 MobiDBLite consensus disorder prediction 1 46 - -
Tsu07g02860 1096 Gene3D Aspartokinase, catalytic domain 657 753 IPR042199 -
Tsu07g02860 1096 SMART finulus 307 356 IPR011598 GO:0046983
Tsu07g02860 1096 MobiDBLite consensus disorder prediction 272 291 - -
Tsu07g02860 1096 MobiDBLite consensus disorder prediction 203 221 - -
Tsu07g02860 1096 Gene3D - 923 1073 - -
Tsu07g02860 1096 SUPERFAMILY ACT-like 1003 1074 IPR045865 -
Tsu07g02860 1096 SUPERFAMILY Carbamate kinase-like 620 913 IPR036393 -
Tsu07g02860 1096 SUPERFAMILY ACT-like 920 1018 IPR045865 -
Tsu07g02860 1096 CDD AAK_AK-LysC-like 618 912 IPR041746 -
Tsu07g02860 1096 ProSitePatterns Aspartokinase signature. 620 628 IPR018042 GO:0004072|GO:0008652
Tsu07g02860 1096 Gene3D - 620 911 IPR036393 -
Tsu07g02860 1096 ProSiteProfiles ACT domain profile. 936 1014 IPR002912 -
Tsu07g02860 1096 MobiDBLite consensus disorder prediction 226 252 - -
Tsu07g02860 1096 Pfam Helix-loop-helix DNA-binding domain 308 350 IPR011598 GO:0046983
Tsu07g02860 1096 Gene3D - 293 364 IPR036638 GO:0046983
Tsu07g02860 1096 Pfam Amino acid kinase family 618 900 IPR001048 -
Tsu07g02860 1096 PANTHER ASPARTATE KINASE 547 1096 - -
Tsu07g02860 1096 Coils Coil 344 364 - -
Tsu07g02860 1096 Gene3D - 932 1007 - -
Tsu07g02860 1096 PANTHER ASPARTOKINASE 547 1096 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02860 Tsu-Chr7 33727930 33743530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02860 143 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.902 1.48e-96 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tsu07g02860 AA_kinase 1.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02860 K00928 - gmx:100792482 902.894