Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02850 atGACTCACTCATCAGAATCTTCTTCTCGTAAAACAATGATCCCTTCATTTCTCTACGGTTCTTCCCCCAAAACCCTACCTGTTATTCACCAGATCATCAATTCCGGTTCCGTTTCCGCTCCTGTTCCCGGTACGCCGCCGTCTCCTTCCATGCGTTCAACTGGATCCACCGGATTCATGATTCCTTCTCCTAAGGAACCGTTCGGTAAGATCGAGATGTATTCACCGGCTTTCTATGCTGCTTGTACTGCTGGTGGAATTCTTAGCTGTGGTCTTACTCATATGAGTGTTACTCCTCTTGACTTAGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCATCTCATCAGGTTTTGGAGTTTTGCTCAAGGAGCAGGGTGTTAAGGGTTTTTTCCGTGGATGGGTGCCAACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGACCAGAGTATGCAGCAAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGACATTGCACTTTGCCCATTTGAGGCTGTTAAGGTCCGTGTTCAAACTCAGCCCGGTTTTGCAAGAGGTCTTGGTGATGGTCTGCCAAAATTTGTCAAGTCTGAAGGAGCTTTGGGGCTATACAAGGGATTGGTGCCTCTATGGGGACGTCAAATTCCATACACAATGATGAAATTTGCCTCTTTTGAGACCATTGTTGAGCAGATCTATAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAAGGGCTGCAACTTGGTGTCAGTTTTGCTGGTGGATACATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAACGCCAAAGGTGCAACAGTTGGTGATGCTGTTAAGAAGTTTGGTGTGGTTGGTCTTTTCACCCGTGGTCTCCCCCTCCGTATTGTTATGATTGGAACACTTACCGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGACTGCCAACCACTGGTGGTGCTGCTCCTGCTCCTGTTCCTGCCGAGATCGGAAATGCTGCATAA 1131 0.4642 MTHSSESSSRKTMIPSFLYGSSPKTLPVIHQIINSGSVSAPVPGTPPSPSMRSTGSTGFMIPSPKEPFGKIEMYSPAFYAACTAGGILSCGLTHMSVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPTPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAPVPAEIGNAA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02850 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 354 IPR018108 -
Tsu07g02850 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 161 IPR018108 -
Tsu07g02850 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 258 IPR018108 -
Tsu07g02850 376 Pfam Mitochondrial carrier protein 80 163 IPR018108 -
Tsu07g02850 376 Pfam Mitochondrial carrier protein 178 262 IPR018108 -
Tsu07g02850 376 Gene3D Mitochondrial carrier domain 170 356 IPR023395 -
Tsu07g02850 376 Gene3D Mitochondrial carrier domain 21 169 IPR023395 -
Tsu07g02850 376 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 370 IPR044677 GO:0005315|GO:1990547
Tsu07g02850 376 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 5 370 - -
Tsu07g02850 376 SUPERFAMILY Mitochondrial carrier 80 350 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02850 Tsu-Chr7 33562788 33566825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02850 7 370 Chloroplast and Mitochondria Gene Families AT5G14040 80.217 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02850 K15102 - gmx:548006 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02850 07 33562788 33566825 Tsu06g02566 06 33109443 33113029 PCT