Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02839 ATGGCAAACAAGTACTGGGTGGTGTCTCTTCCCGTCCAGAACAACAACTCTTCTTCTTCGATATGGAATCAATTGCAGCAAAACATCTCCAAACATTCCTTCGATACTCCTCTTTACAGATTCAACATTCCCAATCTCCGCGTCGGAACCCTAGATTCACTCCTCTCCCTCAGCGATGATCTCAACAagTCTAACGCTTTCGTCGAAGGAGTTTCTCACAAGATCAGGCGTCAGATTGAAGAACTCGAGCGAGTTTCAGGCGTAAACACTGCTGGCCTTACCGTCGATGGAGTTCCTGTTGATTCCTACTTGACTagATTTGTTTGGGATGATGCCAAGTATCCGACTATGTCTCCTTTGAAGGAGATTGTTGATGGCATTCATGCTCAAGTCGCTAAGATTGAGGATGATCTCAAGGTTCGTGTTTCTGAGTATAATAATATCCGAAGTCAGCTCAATGCTATAAACCGAAAGCAAACTGGAAGCTTAGCTGTTCGTGATCTTTCTAACTTGGTAAAACCTGAGGACATTGTAAGTTCAGAACATTTAACTACTCTCCTTGCCATTGTTTCCAAGTATTCACAGAAGGATTGGCTTGCAAGCTATGAAACATTGACTAGCTATGTGGTCCCAAGGTCTTCTAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAATCGTGTGGCAGACAATTTTAGAACTAGTGCACGGGAAAAAGGTTTCCAAATTCGTGATTTTGAATACAGCCCAGAAACACATGAGGGCCGAAAGCAGGAGTTGGATAAATTGATGCAAGACCAGGAAAGTTTGAGGGGTTCTCTGTTGCAATGGTGCTATACCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGCGCTGTGCGCTTATTTTCTGAAAGCATTCTGAGATATGGATTGCCGCCATCTTTCTTGGCATGCGTCTTAGCTCCATCTGTAAAAGCCGAAAAGAAAGTACGTTCAATACTTGAAGGGTTGAGTGATAGCTCAAACAGTGCATACTGGAAAACAGACGAAGATGTAGGTGCTGGAATGGCTGGCTTAGCAGGTGATGCGGATACTCACCCATATGTTTCCTTCACTATCAATCTTCTTTGA 1137 0.4301 MANKYWVVSLPVQNNNSSSSIWNQLQQNISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLNKSNAFVEGVSHKIRRQIEELERVSGVNTAGLTVDGVPVDSYLTRFVWDDAKYPTMSPLKEIVDGIHAQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIVSSEHLTTLLAIVSKYSQKDWLASYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHEGRKQELDKLMQDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFSESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDSSNSAYWKTDEDVGAGMAGLAGDADTHPYVSFTINLL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02839 378 Pfam V-ATPase subunit C 5 371 IPR004907 GO:0033180|GO:0046961|GO:1902600
Tsu07g02839 378 CDD V-ATPase_C 5 375 IPR004907 GO:0033180|GO:0046961|GO:1902600
Tsu07g02839 378 SUPERFAMILY Vacuolar ATP synthase subunit C 1 377 IPR036132 GO:0015078|GO:0033180|GO:1902600
Tsu07g02839 378 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 377 IPR004907 GO:0033180|GO:0046961|GO:1902600
Tsu07g02839 378 Gene3D Vacuolar atp synthase subunit c; domain 1 5 336 - -
Tsu07g02839 378 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 377 - -
Tsu07g02839 378 Gene3D - 165 253 - -
Tsu07g02839 378 Gene3D - 43 314 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02839 1 377 Primary Pumps ATPases(2) AT1G12840 82.228 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02839 K02148 - gmx:100813963 660.218