Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02837 atgATGATGGATGAGGGAGAAGGAAAGAAGAAAGTGGTGGTGGTGAAAACCGAGGCGTGTGATTTAATGGCAGGTGTTGAAGATGAAGTTGGATTTGTCAACGTGAAAGGagacaataacaataacaagaagATTAATGGGTCGGGTCAACGGATCCGAAATGATTATGGTTTTGTTGCTGCTGCATTTGGAACTGTTCAAAGGAAGAAAAGGATGGCTAGACAGAGAAGATCTTCATCTTCTACCATTACCATTCATCTCAAGAATCTTCCTTCTACTACTACTTctgctactactactactacctCCTCTCACGTGCCAATGTCAACAATTCCtcctctttttcactctctccCCCCCACACGtGAAATTGATCATAGGAGGTTGAGATTCCTTTTCCAAAAGGAGTTGAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGGTATTGCCAAAGAAAGCAGCAGAGGCTTTTCTTCCTGCCCTTGAGTCAAAGGAAGGAATTCTTATCAGCATGGATGATATAGATGGTCTTCATGTATGGAGTTTTAAGTACAGGTTTTGGCCTAACAATAACAGTCGGATGTACGTACTTGAAAATACCGGAGACTTTGTTAGCACACACGGTCTACGCTTCGGAGATTCCATTATGGTTTACCAAGataatcaaaatcacaattatGTAATTCAGGCAAAGAAAGCTTGTGATCAAGATGAGTATATGGAAGGAACTAGTGATGCAATCAATGATATCTTCATTGATGATTATGAGGTGAACAAAAGTTGCTTTGATGTAGCCTATCCTGCAATGAATGATACAACAAGCATGTCATTTATATATGACACAACAATCTCAAATGACTCACCACTTGATTTTTTGGGTGGATCAATGACAAATTACTCAAGGATTGGATCAGTTGAAACATTCGGCTCTGTTGAGAATTTGTCACTTGATGACTTCTATTGA 966 0.3665 MMMDEGEGKKKVVVVKTEACDLMAGVEDEVGFVNVKGDNNNNKKINGSGQRIRNDYGFVAAAFGTVQRKKRMARQRRSSSSTITIHLKNLPSTTTSATTTTTSSHVPMSTIPPLFHSLPPTREIDHRRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPALESKEGILISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVSTHGLRFGDSIMVYQDNQNHNYVIQAKKACDQDEYMEGTSDAINDIFIDDYEVNKSCFDVAYPAMNDTTSMSFIYDTTISNDSPLDFLGGSMTNYSRIGSVETFGSVENLSLDDFY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02837 321 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 55 321 IPR044800 GO:0003700
Tsu07g02837 321 MobiDBLite consensus disorder prediction 73 112 - -
Tsu07g02837 321 CDD B3_DNA 131 233 IPR003340 GO:0003677
Tsu07g02837 321 Pfam B3 DNA binding domain 133 230 IPR003340 GO:0003677
Tsu07g02837 321 Gene3D - 129 246 IPR015300 -
Tsu07g02837 321 SMART B3_2 133 235 IPR003340 GO:0003677
Tsu07g02837 321 ProSiteProfiles B3 DNA-binding domain profile. 133 235 IPR003340 GO:0003677
Tsu07g02837 321 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 55 321 - -
Tsu07g02837 321 MobiDBLite consensus disorder prediction 77 110 - -
Tsu07g02837 321 SUPERFAMILY DNA-binding pseudobarrel domain 131 234 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02837 Tsu-Chr7 33448677 33452153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02837 1 321 B3 DNA Binding Superfamily AT3G26790 46.518 4.83e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tsu07g02837 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02837 - - gmx:100783961 408.297