Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02816 ATGGAAAATAATGTTGAAGAGCATATGCATATGGATGAATCTGTTGCCTCTATGGAGGGACTAGAAGACTTGTCAGTTGGGGTAAGTAGTGATGAAGCACCATGTGACACCACTGACGATGATGCCATTAGTGTTGAGGCTAGCGAAGGCACCGACATTCTTTTAAATATTGATAGTATGGAGGATATTCTTAGCATGAACCTAAAGGGGTTAAGTCCACATGAGACAAggaaatttcatttttcaagtTTGGAAATGGCTTATGAGTTCTACAACCGATATGCTAGAATGAATGAGTTTTCAGTCCGCAAGAGCAAAATACTCTATAACAAGAAAGGGGAAATATTACAGCGGACGTTTGTCTGCCACAAACAAGGGTTTAAGGAGGATAAAggtttaacaaaagaaaatcgtAAGCGCGAGCGTAAACCTGAGACTCGGACTGGATGTGACGCGAAATTTAGAGTTCATATAGATATTTTGTCACAACGTTGA 495 0.3758 MENNVEEHMHMDESVASMEGLEDLSVGVSSDEAPCDTTDDDAISVEASEGTDILLNIDSMEDILSMNLKGLSPHETRKFHFSSLEMAYEFYNRYARMNEFSVRKSKILYNKKGEILQRTFVCHKQGFKEDKGLTKENRKRERKPETRTGCDAKFRVHIDILSQR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02816 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 36 162 - -
Tsu07g02816 164 Pfam FAR1 DNA-binding domain 89 157 IPR004330 -
Tsu07g02816 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 36 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02816 Tsu-Chr7 33185538 33186114 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g02816 FAR1 1.8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02816 - - mtr:MTR_1g070355 236.884