Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02814 ATGTCGTTTCCGTGCGACTACTGCGACACAAGAAACGCGGTGCTGTATTGCAAAGCAGACTCGGCAAAACTCTGCTTAGTTTGCGACCAGCACGTGCACTCGGCGAACGCACTAGCACTCAAGCACGTGCGTTACCAGATTTGTCAAAACTGTAAAAACGACGCCGCTTCAGTTCGTTGCTTCACCGAAAATTTAGTTCAATGTCACCGTTGCGATTGGGATGCTCACGGCGGCGattcatcttcctcttcttctaaCTACCACCACAACCTCCGCCGACTCGACGGACTCACTGGATGTCCTTCCGTTAACGAGATCGTGTCTGCTTTGGGACTTGATTTGAAACCAAACGATGCCGTTTTTGTTGCGGAGTTTGAAGGTCCTGTTGTTCCTGTTGTTCAGAATAGAGATGAAGTGTATGAACAAGTTGTGGAAGTTGCCAAGAGAAGAAGGAATTTGGATTGGTCAGTTGAAAATGAATTCAGATTCAATGATTGTAGTAATGAAGTTGATGATTTGTTGTTGCTTCAACAAACTCCTTTTACATCTTTGCTTAATTTTTCATCCGAATTGGATGTCGGTGCTAAgaaaaatcatcataataatgaTTATGGAAATGAAACTGAGGTTCTTCTCTGGAATCGTAATCCAACGTATCAGCCTCCTCAGGTCTGGGATTTTCAGTTACAGAAATCAAGAGATATGACATTCAATGGTGTAGAAGATGCTTCCTTATCGATTCCGAAATCATTGCAAGATGTGCATAATATGAATTGCTCAACACTTGGGGATGATATTCTATCAAGAAATGTAAGCATTCTTTGTAGTCGTAGATAG 837 0.4098 MSFPCDYCDTRNAVLYCKADSAKLCLVCDQHVHSANALALKHVRYQICQNCKNDAASVRCFTENLVQCHRCDWDAHGGDSSSSSSNYHHNLRRLDGLTGCPSVNEIVSALGLDLKPNDAVFVAEFEGPVVPVVQNRDEVYEQVVEVAKRRRNLDWSVENEFRFNDCSNEVDDLLLLQQTPFTSLLNFSSELDVGAKKNHHNNDYGNETEVLLWNRNPTYQPPQVWDFQLQKSRDMTFNGVEDASLSIPKSLQDVHNMNCSTLGDDILSRNVSILCSRR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02814 278 CDD Bbox1_BBX-like 4 47 - -
Tsu07g02814 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED 3 249 - -
Tsu07g02814 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 249 - -
Tsu07g02814 278 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Tsu07g02814 278 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02814 Tsu-Chr7 33164265 33168716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02814 5 115 C2C2-CO-like Transcription Factor Family AT2G33500 57.658 7.23e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02814 - - aprc:113862926 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02814 07 33164265 33168716 Tsu07g02814 07 33164265 33168716 ECH