Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02813 ATGGGTCGTTGCCCATGTTTTGGGTCTAGAAAAAAGGGGAAAGGGAAGAACCTCAATAAtcaagaagaggaaaaaaacaaCCTTAAATCTCTTGAAACTCCCTCTTCTGGAAGATCTGTAGAACAGAAACCAGAGTTGTTTGAACAAAAAACAGAACAGAAACCAGTAGCTATACCAACGTTGAATACCGACATTTCTGATAAGGCTCGGATATTTACCTTCAGAGAGCTTGCAACGGCAACAAAAAATTTTAGGGATGAAACCTGCATTGGTCAAGGTGGATTTGGAACTGTTTACAAAGGAAAGATAGATGGCATTAGTCAGGTTGTAGCTGTTAAAAGACTTGATACAACCGGTGTCCAAGGAGAGAAAGAATTTCTAGTCGAGGTTCTCATGCTCTCTCTTCTACACCATCCCAACCTAGTTAGTATGATTGGTTACTGCGCCGAAGGAGATCAACGGCTTCTTGTGTATGAATACATGCCTATGGGATCCTTAGAATCTCATCTCCATGATCTTTCACCGGATACAGAACCGCTCGATTGGAATAAGAGAATGATGATAGCGGCTGGGGCAGCAAGAGGAATAAATTATCTGCACAATGAAGCAAAGCCTACTGTTATATACAGAGATCTGAAAACATCTAATATACTATTGGATGAAGAATTCCATCCAAAGCTTTCTGATTTTGGGCTTGCCAAATTCGGTCCGACTGGTGACCAATCATATGTTGCTACAAGAGTGATGGGAACACATGGTTATTGTGCACCTGAGTATGCAACTACTGGAAAATTAACAATGAGATCTgatatatatagttttggagTTGTGCTATTGGAGATAATTACCGGACGTAAAGCTTATGACGATACTCGTGAGCATGACAAGCATCTTGTTGATTGGGCACGCCCAATGTTCAGAGACAGAAAGAGTTTTCCAAAATTAGTTGATCATCGTTTGCAAGGTCACTACACTGTATCTGGTCTAAGGATGGCCATTGAAATGGCAGCCATGTGTCTTCGAGAAGAGCCACGTTATCGGCCTGATGCAAGCGATATAGTACTAGCCCTAGATTACTTGTCATCCAAGCAATATGTTCCAAAAGGATCTGGAACAGTTAGCCCGGTATCAATGGATATCGACGACTCCCCAGAAGAAACACCTATGATTTTGCCTAAAGACTTGCTAAGAGAGCAAGCTGTTGCAGAAGCTAAACAGTGGGGTGAGACATGGAGAGATAAGAGAAGACAAAGTGACCAAAGTCCTGAGGACTTAAGggggtaa 1284 0.4065 MGRCPCFGSRKKGKGKNLNNQEEEKNNLKSLETPSSGRSVEQKPELFEQKTEQKPVAIPTLNTDISDKARIFTFRELATATKNFRDETCIGQGGFGTVYKGKIDGISQVVAVKRLDTTGVQGEKEFLVEVLMLSLLHHPNLVSMIGYCAEGDQRLLVYEYMPMGSLESHLHDLSPDTEPLDWNKRMMIAAGAARGINYLHNEAKPTVIYRDLKTSNILLDEEFHPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATTGKLTMRSDIYSFGVVLLEIITGRKAYDDTREHDKHLVDWARPMFRDRKSFPKLVDHRLQGHYTVSGLRMAIEMAAMCLREEPRYRPDASDIVLALDYLSSKQYVPKGSGTVSPVSMDIDDSPEETPMILPKDLLREQAVAEAKQWGETWRDKRRQSDQSPEDLRG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02813 427 ProSiteProfiles Protein kinase domain profile. 84 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02813 427 Coils Coil 11 31 - -
Tsu07g02813 427 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Tsu07g02813 427 CDD STKc_IRAK 90 354 - -
Tsu07g02813 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tsu07g02813 427 PANTHER OS07G0668900 PROTEIN 4 375 - -
Tsu07g02813 427 MobiDBLite consensus disorder prediction 1 53 - -
Tsu07g02813 427 Gene3D Phosphorylase Kinase; domain 1 45 160 - -
Tsu07g02813 427 SUPERFAMILY Protein kinase-like (PK-like) 66 357 IPR011009 -
Tsu07g02813 427 MobiDBLite consensus disorder prediction 15 29 - -
Tsu07g02813 427 MobiDBLite consensus disorder prediction 407 427 - -
Tsu07g02813 427 Gene3D Transferase(Phosphotransferase) domain 1 161 370 - -
Tsu07g02813 427 Pfam Protein kinase domain 85 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02813 427 PANTHER OS07G0668900 PROTEIN 4 375 - -
Tsu07g02813 427 SMART serkin_6 84 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02813 427 MobiDBLite consensus disorder prediction 405 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02813 Tsu-Chr7 33146711 33151119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02813 69 421 Glycoside Hydrolase AT3G07070 57.263 9.77e-141 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu07g02813 Pkinase 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02813 K13430 - gmx:100809298 577.015