Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02806 ATGGCTATAGATAAATATGTTAACTATGATTTGGAAGGGGCCCCTAAGTTGCCTATTGGATTCAGGTTTGATCCAACAGATGACATTCTTGTGAACTTTTACCTGAAGTCAAAGGTTTATAATCAACCTCTTTCACTTCATGGTATTCAAGAATTTGATGTCTTTCAAACTGAGCCTTGGATGCTTCCATATGATAGGAACTCTTTGAAAAATAGGAAATATTATATCTTCGATATTAGGAACCGTAGGTTCCAAAATATGGATACGAGAGTCACCGGAAATGGTGAATGGAGAACGGTGGAAAAGAACAAGGAACTTGCTCTCCCAAGCAACTACTTCATTGGTAGAAAGAACACCCTTGTATATTGGAGAAAACAAGGAAATGAAGTTGTTAAGACACAATGGGTGATGCATGAATTTCGCATGGGTACAATTTTTCATCCAATAATGGTGACAACTTTAGGTGCCTATCGCATTTTTAAGATGAAGGTTGCAAAGGTTGAGAAGAAGGTGAATATACCAACCGTGGTTGATTTTACAATGGAGGATACAAGTTCTTCCGCCCCTCCTCCTTCTCCATGA 582 0.3849 MAIDKYVNYDLEGAPKLPIGFRFDPTDDILVNFYLKSKVYNQPLSLHGIQEFDVFQTEPWMLPYDRNSLKNRKYYIFDIRNRRFQNMDTRVTGNGEWRTVEKNKELALPSNYFIGRKNTLVYWRKQGNEVVKTQWVMHEFRMGTIFHPIMVTTLGAYRIFKMKVAKVEKKVNIPTVVDFTMEDTSSSAPPPSP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02806 193 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Tsu07g02806 193 SUPERFAMILY NAC domain 13 156 IPR036093 GO:0003677|GO:0006355
Tsu07g02806 193 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Tsu07g02806 193 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Tsu07g02806 193 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 164 - -
Tsu07g02806 193 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02806 Tsu-Chr7 33003162 33004934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02806 17 190 NAC Transcription Factor Family AT5G07680 35.000 7.19e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g02806 NAM 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02806 - - cam:101501671 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02806 07 33003162 33004934 Tsu03g02803 03 37729170 37730999 PCT