Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02776 ATGTCTTCATCGGAACCTAAATACGAAATCCCACCGGCCCCAACATACAAGACCCCACCAGCACTAGTAGCATTCACCCTCACCGTCCTCATCCTATGCTTTGTGGCTTTTAGCGTCGTTTATCTTTGCAAGTATTGTTTTGCAAGCGTTTTGCATACTTGGGCCTTACAACGCACGGCCTCAGGATCCCTCGTTCGTCTCTCACCTGAGAGGTCACCTGCTAGGGGACTCGATCTTACCCTTCTAGAAAAATTCCCAACTTTCCTCTATGCCTCCGTAAAAGACCTTCGCAAAGAGAAGAGTTATAGCTTAGAATGTGCCATTTGTTTGCTAGAGTTTGAAGACGATAGCATGCTTCGTCTTCTAACCATTTGTTGCCATGTCTTCCACCAAGAATGTATTGACCTATGGCTTCAATCTCACAAGACATGCCCCGTTTGTCGAACCGACCTTGATTCACCTCCCGACCAAATGTCAAAACACGGCGGGGacaacaccaccaccaacaacaacaataatgaACAAGAGGGTATGTCATCATTACCGTGCGATGATGACATACACATTGATATTAGAGAAGAGGAAAGAGACAGTGTTGGTGAGATCACTAGAGCTCAAATACATGAAGGTGATAAACATGTGAGTACAAGCATGAGACAACAAGAAGAACAAAGATTTTCAAGGTGTCATTCAACAGGACATTCTATAGTAATGATTAGAGGTGAAGAAAAAGATCATGAGAAATATACATTGATATTACCTGAACATGTTATAAGAGGAGGACACAACTGCACAAAGAGTTGTACAAATTACAGTGAGATGACATTGACAGTGCCTACACCTTGTAGTAATTGTGGTTTTATTAAACCAATAATTGCCTCCTCTTCACTTGCTCAAGCTCAAGAGGCTTGA 912 0.4134 MSSSEPKYEIPPAPTYKTPPALVAFTLTVLILCFVAFSVVYLCKYCFASVLHTWALQRTASGSLVRLSPERSPARGLDLTLLEKFPTFLYASVKDLRKEKSYSLECAICLLEFEDDSMLRLLTICCHVFHQECIDLWLQSHKTCPVCRTDLDSPPDQMSKHGGDNTTTNNNNNEQEGMSSLPCDDDIHIDIREEERDSVGEITRAQIHEGDKHVSTSMRQQEEQRFSRCHSTGHSIVMIRGEEKDHEKYTLILPEHVIRGGHNCTKSCTNYSEMTLTVPTPCSNCGFIKPIIASSSLAQAQEA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02776 303 MobiDBLite consensus disorder prediction 159 179 - -
Tsu07g02776 303 PANTHER RING FINGER DOMAIN-CONTAINING 3 276 - -
Tsu07g02776 303 SMART ring_2 106 147 IPR001841 -
Tsu07g02776 303 CDD RING-H2_EL5_like 105 148 - -
Tsu07g02776 303 MobiDBLite consensus disorder prediction 153 182 - -
Tsu07g02776 303 Pfam Ring finger domain 105 148 IPR001841 -
Tsu07g02776 303 PANTHER RING-H2 FINGER PROTEIN ATL29 3 276 - -
Tsu07g02776 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 154 IPR013083 -
Tsu07g02776 303 SUPERFAMILY RING/U-box 82 156 - -
Tsu07g02776 303 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02776 Tsu-Chr7 32632106 32633017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02776 20 259 Rapid Response to Elicitors AT2G35000 35.102 1.43e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02776 - - gmx:100815505 338.191